LOCUS BC014789 3528 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 2, mRNA (cDNA clone
MGC:17334 IMAGE:4212702), complete cds.
ACCESSION BC014789
VERSION BC014789.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: m Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542836.
FEATURES Location/Qualifiers
source 1..3528
/db_xref="H-InvDB:HIT000036858"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17334 IMAGE:4212702"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3528
/gene="GALNTL2"
/gene_synonym="GALNT13"
/gene_synonym="GALNT15"
/gene_synonym="GALNT7"
/db_xref="GeneID:117248"
/db_xref="HGNC:HGNC:21531"
CDS 426..2345
/gene="GALNTL2"
/gene_synonym="GALNT13"
/gene_synonym="GALNT15"
/gene_synonym="GALNT7"
/codon_start=1
/product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferase-like 2"
/protein_id="AAH14789.1"
/db_xref="GeneID:117248"
/db_xref="HGNC:HGNC:21531"
/translation="MLLRKRYRHRPCRLQFLLLLLMLGCVLMMVAMLHPPHHTLHQTV
TAQASKHSPEARYRLDFGESQDWVLEAEDEGEEYSPLEGLPPFISLREDQLLVAVALP
QARRNQSQGRRGGSYRLIKQPRRQDKEAPKRDWGADEDGEVSEEEELTPFSLDPRGLQ
EALSARIPLQRALPEVRHPLCLQQHPQDSLPTASVILCFHDEAWSTLLRTVHSILDTV
PRAFLKEIILVDDLSQQGQLKSALSEYVARLEGVKLLRSNKRLGAIRARMLGATRATG
DVLVFMDAHCECHPGWLEPLLSRIAGDRSRVVSPVIDVIDWKTFQYYPSKDLQRGVLD
WKLDFHWEPLPEHVRKALQSPISPIRSPVVPGEVVAMDRHYFQNTGAYDSLMSLRGGE
NLELSFKAWLCGGSVEILPCSRVGHIYQNQDSHSPLDQETTLRNRVRIAETWLGSFKE
TFYKHSPEAFSLSKAEKPDCMERLQLQRRLGCRTFHWFLANVYPELYPSEPRPSFSGK
LHNTGLGLCADCQAEGDILGCPMVLAPCSDSRQQQYLQHTSRKEIHFGSPQHLCFAVR
QEQVILQNCTEEGLAIHQQHWDFQENGMIVHILSGKCMEAVVQENNKDLYLRPCDGKA
RQQWRFDQINAVDER"
BASE COUNT 940 a 871 c 924 g 793 t
ORIGIN
1 gtcagccctg cttgactgag aacccaccag ctcatcccag acacctcata gcaacctatt
61 tatacaaagg gggaaagaaa cacctgagca gaatggaatc attatttttt tcccaaggag
121 aaaaccgggg taaagggagg gaagcaattc aatttgaagt ccctgtgaat gggctttcag
181 aaggcaatta aagaaatcca ctcagagagg acttggggtg aaacttgggt cctgtggttt
241 tctgattgta agtggaagca ggtcttgcac acgctgttgg caaatgtcag gaccaggtta
301 agtgactggc agaaaaactt ccaggtggaa caagcaaccc aggttctgct gcaagcttga
361 aggagcctgg agcgggagaa agctaacttg aacatgacct gttgcatttg gcaagttcta
421 gcaacatgct cctaaggaag cgatacaggc acagaccatg cagactccag ttcctcctgc
481 tgctcctgat gctgggatgc gtcctgatga tggtggcgat gttgcaccct ccccaccaca
541 ccctgcacca gactgtcaca gcccaagcca gcaagcacag ccctgaagcc aggtaccgcc
601 tggactttgg ggaatcccag gattgggtac tggaagctga ggatgagggt gaagagtaca
661 gccctctgga gggcctgcca ccctttatct cactgcggga ggatcagctg ctggtggccg
721 tggccttacc ccaggccaga aggaaccaga gccagggcag gagaggtggg agctaccgcc
781 tcatcaagca gccaaggagg caggataagg aagccccaaa gagggactgg ggggctgatg
841 aggacgggga ggtgtctgaa gaagaggagt tgaccccgtt cagcctggac ccacgtggcc
901 tccaggaggc actcagtgcc cgcatccccc tccagagggc tctgcccgag gtgcggcacc
961 cactgtgtct gcagcagcac cctcaggaca gcctgcccac agccagcgtc atcctctgtt
1021 tccatgatga ggcctggtcc actctcctgc ggactgtaca cagcatcctc gacacagtgc
1081 ccagggcctt cctgaaggag atcatcctcg tggacgacct cagccagcaa ggacaactca
1141 agtctgctct cagcgaatat gtggccaggc tggagggggt gaagttactc aggagcaaca
1201 agaggctggg tgccatcagg gcccggatgc tgggagccac cagagccacc ggggatgtgc
1261 tcgtcttcat ggatgcccac tgcgagtgcc acccaggctg gctggagccc ctcctcagca
1321 gaatagctgg tgacaggagc cgagtggtat ctccggtgat agatgtgatt gactggaaga
1381 ctttccagta ttacccctca aaggacctgc agcgtggggt gttggactgg aagctggatt
1441 tccactggga acctttgcca gagcatgtga ggaaggccct ccagtccccc ataagcccca
1501 tcaggagccc tgtggtgccc ggagaggtgg tggccatgga cagacattac ttccaaaaca
1561 ctggagcgta tgactctctt atgtcgctgc gaggtggtga aaacctcgaa ctgtctttca
1621 aggcctggct ctgtggtggc tctgttgaaa tccttccctg ctctcgggta ggacacatct
1681 accaaaatca ggattcccat tcccccctcg accaggagac caccctgagg aacagggttc
1741 gcattgctga gacctggctg gggtcattca aagaaacctt ctacaagcat agcccagagg
1801 ccttctcctt gagcaaggct gagaagccag actgcatgga acgcttgcag ctgcaaagga
1861 gactgggttg tcggacattc cactggtttc tggctaatgt ctaccctgag ctgtacccat
1921 ctgaacccag gcccagtttc tctggaaagc tccacaacac tggacttggg ctctgtgcag
1981 actgccaggc agaaggggac atcctgggct gtcccatggt gttggctcct tgcagtgaca
2041 gccggcagca acagtacctg cagcacacca gcaggaagga gattcacttt ggcagcccac
2101 agcacctgtg ctttgctgtc aggcaggagc aggtgattct tcagaactgc acggaggaag
2161 gcctggccat ccaccagcag cactgggact tccaggagaa tgggatgatt gtccacattc
2221 tttctgggaa atgcatggaa gctgtggtgc aagaaaacaa taaagatttg tacctgcgtc
2281 cgtgtgatgg aaaagcccgc cagcagtggc gttttgacca gatcaatgct gtggatgaac
2341 gatgaatgtc aatgtcagaa ggaaaagaga attttggcca tcaaaatcca gctccaagtg
2401 aacttaaaga gcttatatat ttcatgaagc tgatcctttt gtgtgtgtgc tcctggtgtt
2461 aggagagaaa aaagctctat gaaagaatat aggaagtttc tccttttcac accttatttc
2521 attgactgct ggctgcttta aaaaaaaaaa aaggatccat tgtaccgttg tcttcatcac
2581 tgggaaatga ttattacata gtacagaaga ttctttgttt ttctccactg agcacttaac
2641 aattgctttc tctctggcct ggacattctc tggcagcacc tccaggatac ataaattcaa
2701 tggatcaatt tatttgtctt caaatggcct taacttggat tgtctgtttg gccaaccatg
2761 aaaattaaag agtgaagcag atgtaatggc ctgacattcc aaaaactctg aattgggttt
2821 attagcacaa atgttgtgtt catttgttga gccatatctc agaagaagga aagggagcta
2881 cagaaaggag gtttaggatt gcagagaaga tgcaagagca ctttggccca attctccagc
2941 tcaacccagc agctgaaaag cttcaagaga tctaggaaaa gacattttca tgttaatgag
3001 aatttccacc attgtagaga atttccttcc tactgagaat ctacctctat tccccctgcc
3061 ctagctcttc tctaacttgg ttaaccataa ccataaccag attcccttgc aatcgatttc
3121 tctttagtcg ttggtgttag aagtaccagc acaatttgag cattcccatt aacaaaggtg
3181 ttcacagttg agaaactctc ctgccgggcg cggtggctca tgcctgtaat tccagcactt
3241 tgggaggcag agttgggagg atcacctgat gtcaggggtt tgagaccagc ctggtcaaca
3301 ttgcaaaacc ttgtctctac taaaaataca aaaattagct gggcatggtg gcgcatacct
3361 gtaatcccag ctacttggga ggctgaggca agagaatcgc ttgaacccag gaggcagagg
3421 ttgcagtgag ctgagatcat gccattgcac tccaacctgg gtgacagagt gagactccat
3481 ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//