LOCUS BC014781 1360 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens lecithin-cholesterol acyltransferase, mRNA (cDNA clone MGC:17087 IMAGE:4155094), complete cds. ACCESSION BC014781 VERSION BC014781.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1360) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1360) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: n Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557891. FEATURES Location/Qualifiers source 1..1360 /db_xref="H-InvDB:HIT000036854" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17087 IMAGE:4155094" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1360 /gene="LCAT" /db_xref="GeneID:3931" /db_xref="HGNC:HGNC:6522" /db_xref="MIM:606967" CDS 2..1324 /gene="LCAT" /codon_start=1 /product="lecithin-cholesterol acyltransferase" /protein_id="AAH14781.1" /db_xref="GeneID:3931" /db_xref="HGNC:HGNC:6522" /db_xref="MIM:606967" /translation="MGPPGSPWQWVTLLLGLLLPPAAPFWLLNVLFPPHTTPKAELSN HTRPVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWIDN TRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSKLAGYLHTLVQNLVNNGYVRD ETVRAAPYDWRLEPGQQEEYYRKLAGLVEEMHAAYGKPVFLIGHSLGCLHLLYFLLRQ PQAWKDRFIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRITTTSPWM FPSRMAWPEDHVFISTPSFNYTGRDFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVE VYCLYGVGLPTPRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVH LLPLHGIQHLNMVFSNLTLEHINAILLGAYRQGPPASPTASPEPPPPE" BASE COUNT 264 a 456 c 365 g 275 t ORIGIN 1 aatggggccg cccggctccc catggcagtg ggtgacgctg ctgctggggc tgctgctccc 61 tcctgccgcc cccttctggc tcctcaatgt gctcttcccc ccgcacacca cgcccaaggc 121 tgagctcagt aaccacacac ggcccgtcat cctcgtgccc ggctgcctgg ggaatcagct 181 agaagccaag ctggacaaac cagatgtggt gaactggatg tgctaccgca agacagagga 241 cttcttcacc atctggctgg atctcaacat gttcctaccc cttggggtag actgctggat 301 cgataacacc agggttgtct acaaccggag ctctgggctc gtgtccaacg cccctggtgt 361 ccagatccgc gtccctggct ttggcaagac ctactctgtg gagtacctgg acagcagcaa 421 gctggcaggg tacctgcaca cactggtgca gaacctggtc aacaatggct acgtgcggga 481 cgagactgtg cgcgccgccc cctatgactg gcggctggag cccggccagc aggaggagta 541 ctaccgcaag ctcgcagggc tggtggagga gatgcacgct gcctatggga agcctgtctt 601 cctcattggc cacagcctcg gctgtctaca cttgctctat ttcctgctgc gccagcccca 661 ggcctggaag gaccgcttta ttgatggctt catctctctt ggggctccct ggggtggctc 721 catcaagccc atgctggtct tggcctcagg tgacaaccag ggcatcccca tcatgtccag 781 catcaagctg aaagaggagc agcgcataac caccacctcc ccctggatgt ttccctctcg 841 catggcgtgg cctgaggacc acgtgttcat ttccacaccc agcttcaact acacaggccg 901 tgacttccaa cgcttctttg cagacctgca ctttgaggaa ggctggtaca tgtggctgca 961 gtcacgtgac ctcctggcag gactcccagc acctggtgtg gaagtatact gtctttacgg 1021 cgtgggcctg cccacgcccc gcacctacat ctacgaccac ggcttcccct acacggaccc 1081 tgtgggtgtg ctctatgagg atggtgatga cacggtggcg acccgcagca ccgagctctg 1141 tggcctgtgg cagggccgcc agccacagcc tgtgcacctg ctgcccctgc acgggataca 1201 gcatctcaac atggtcttca gcaacctgac cctggagcac atcaatgcca tcctgctggg 1261 tgcctaccgc cagggtcccc ctgcatcccc gactgccagc ccagagcccc cgcctcctga 1321 ataaagacct tcctttgcta ccgtaaaaaa aaaaaaaaaa //