LOCUS BC014640 3479 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens collagen, type XIV, alpha 1, mRNA (cDNA clone IMAGE:2960796), complete cds. ACCESSION BC014640 VERSION BC014640.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3479) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3479) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: b Column: 1 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..3479 /db_xref="H-InvDB:HIT000036825" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2960796" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3479 /gene="COL14A1" /db_xref="GeneID:7373" /db_xref="HGNC:HGNC:2191" /db_xref="MIM:120324" CDS 381..2660 /gene="COL14A1" /codon_start=1 /product="COL14A1 protein" /protein_id="AAH14640.1" /db_xref="GeneID:7373" /db_xref="HGNC:HGNC:2191" /db_xref="MIM:120324" /translation="MDPGALEMKNFNKIISFLYSTVGALNKIGTDGTQVAMVQFTDDP RTEFKLNAYKTKETLLDAIKHISYKGGNTKTGKAIKYVRDTLFTAESGTRRGIPKVIV VITDGRSQDDVNKISREMQLDGYSIFAIGVADADYSELVSIGSKPSARHVFFVDDFDA FKKIEDELITFVCETASATCPVVHKDGIDLAGFKMMEMFGLVEKDFSSVEGVSMEPGT FNVFPCYQLHKDALVSQPTRYLHPEGLPSDYTISFLFRILPDTPQEPFALWEILNKNS DPLVGVILDNGGKTLTYFNYDQSGDFQTLTFEGPEIRKIFYGSFHKLHIVVSETLVKV VIDCKQVGEKAMNASANITSDGVEVLGKMVRSRGPGGNSAPFQLQMFDIVCSTSWANT DKCCELPGLRDDESCPDLPHSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEPGPKGP DGPRGEIGLPGPQGPPGPQGPSGLSIQGMPGMPGEKGEKGDTGLPGPQGIPGGVGSPG RDGSPGQRGLPGKDGSSGPPGPPGPIGIPGTPGVPGITGSMGPQGALGPPGVPGAKGE RGERGDLQSQAMVRSVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGR PGSPGAPGEQGPPGTPGFPGNAGVPGTPGERGLTGIKGEKGNPGVGTQGPRGPPGPAG PSGESRPGSPGPPGSPGPRGPPGHLGVPGPQGPSGQPGYCDPSSCSAYGVRAPHPDQP EFTPVQDELEAMELWGPGV" BASE COUNT 1007 a 763 c 842 g 867 t ORIGIN 1 gacaggcatg gtgaaaacat tgttcttggg tgttaccaat ctccaagcca aacatgttga 61 aatgaccagc ttgtgtgccc actggcaggt acatcgccat gccacagcct atagggttgt 121 tatagaatcc ctccaggata ggcaaaagca agaatccact gtgggtggag ggacaaccag 181 gcattgcttc tatggacttc agcctgattc tgaatataaa atcagtgttt atacaaagct 241 ccaggagatt gaaggaccta gtgtgagcat aatggaaaaa acacaatcac ttcctacacg 301 accaccaact tttcctccaa ccattccacc agcaaaagaa gtatgtaagg cggccaaggc 361 tgacctggta tttatggtgg atggatcctg gagcattgga gatgaaaaat ttcaataaga 421 tcatcagctt tctatacagc actgttggag ccctgaacaa gattggcaca gatggaaccc 481 aagttgcaat ggttcagttc actgatgatc ccagaacaga atttaaacta aatgcttaca 541 aaaccaaaga gactcttctt gatgcaatta aacacatttc atacaaagga ggaaatacaa 601 aaacaggaaa agcaattaag tatgttcgag ataccttgtt cactgcagag tcaggtacaa 661 gaaggggcat cccaaaggtt atcgtggtta taactgatgg aagatcacaa gatgatgtga 721 acaaaatctc cagggagatg caattagatg gctatagcat ttttgcaatt ggtgtggccg 781 atgcagatta ctcggagttg gttagcattg gcagtaagcc cagcgcacgc catgtcttct 841 ttgtggatga ctttgacgcc tttaagaaaa tcgaagatga gttaattact tttgtctgcg 901 aaacagcatc agcaacctgt ccagtggtac acaaggatgg cattgatctt gcaggattta 961 agatgatgga aatgtttggt ttggttgaaa aagatttttc atcagtggaa ggggtttcta 1021 tggagcctgg taccttcaat gtgtttccat gttaccaact ccataaagat gccctggttt 1081 cccagccaac caggtacttg cacccagaag gattgccctc cgactacaca atcagttttc 1141 tattccggat tcttcctgac actccacagg agccatttgc tctttgggag attttaaata 1201 aaaattctga cccattggtt ggggttattt tagacaatgg tgggaaaact ctaacatatt 1261 tcaactatga ccagagtggg gattttcaaa ctcttacttt cgaaggacct gaaattagga 1321 aaatttttta tggaagcttt cacaagctac acattgttgt cagtgagact ttggtcaaag 1381 tggttattga ctgcaagcaa gtgggtgaga aggcaatgaa cgcatcagct aatatcacgt 1441 cagatggtgt agaagtgcta gggaaaatgg ttcgatcaag aggaccaggt ggaaactctg 1501 caccgttcca gttacagatg tttgatattg tttgctccac atcatgggcc aatacagaca 1561 aatgctgtga acttccaggc ctgagagatg atgagtcttg cccagacctt ccccattcct 1621 gctcctgttc tgaaaccaat gaagtggctc tgggaccagc gggcccacca ggtggtccag 1681 gactccgagg accaaagggc cagcaaggtg aaccgggtcc aaagggacca gatggccctc 1741 ggggtgaaat tggtctgcca ggacctcagg gtccacctgg acctcaagga ccaagtggtc 1801 tgtccattca aggaatgccc ggaatgccag gagaaaaagg agagaaagga gatactggcc 1861 ttccaggtcc acagggtatc ccaggaggcg ttggttcacc aggacgtgat ggctcaccag 1921 gccagagggg ccttccggga aaggatggat cctcgggacc tccaggacca ccagggccaa 1981 taggcattcc tggcacccct ggagtcccag ggatcacagg aagcatggga ccgcaaggcg 2041 ccctgggacc acctggtgtc cctggagcaa agggggaacg aggagagcgg ggtgacctgc 2101 agtctcaagc catggtgaga tcagtggcgc gtcaagtatg cgaacagctc atccagagtc 2161 acatggccag gtacactgcc atcctcaacc agattcccag ccactcctca tccatccgga 2221 ctgtccaagg gcctcctggg gagcctggga ggccaggctc acctggagcc cctggtgaac 2281 aaggaccccc aggcacacca ggcttccccg gaaatgcagg cgtgccaggg accccaggag 2341 aacgaggtct aactggtatc aaaggagaaa aaggaaatcc aggcgttgga acccaaggtc 2401 caagaggccc ccctggacca gcaggacctt caggggagag tcggcctggc agccctgggc 2461 cccctggctc tcctggacca agaggcccac caggtcatct gggggttcct ggaccccaag 2521 gtccttctgg ccagcctgga tattgtgacc cctcatcatg ttctgcctat ggtgtgagag 2581 ctccccatcc agatcagcca gagttcaccc ctgtccaaga tgagctggaa gccatggaac 2641 tgtggggccc tggagtctga tagcctcagg agaaatttga agaccaactg caagaactct 2701 taaggaatct tgtttgagaa aatgttgtta tgtggtttgt atgctacttt tggggggcag 2761 ggctcatttc agcagcctaa atctcctcct tggataatgt taatattatt attattatta 2821 acaaaaaata tatattttta aaaagttccc ttaatctatg acatggtagc aatgatttcc 2881 ctttggtgtc ttaatggcat gtcagataat ttgtttttcc agagaagaga gctcaaagag 2941 gaattgggaa aaataaattg aactctggaa tcttctctct caagtcctaa aatgaacaaa 3001 cagatatgat tgtgtttgag ggaaatatgt ccctagcagg aaaagaattc aaagaggttc 3061 aaagaatatg tcacttactc ctacttgcta taggaataac cttgctgata agaaaaaaag 3121 ggacaatatt ggagaaacta cctcttgttt aattgatctg tccaactctg agatcacttg 3181 gtaactggtt tcatgtgtat ccaaaaatca gcatttggat ttaagctttc tgaatttggt 3241 agtttaagaa acagatttag tttttcagtg gttttaactc atgtgaaata atgattttcc 3301 accagctctg atgcaaagag atataatttt aatgaacgat ttatccagca gtttgttcca 3361 ggggttgcct ctccttatct acggggatta ctttgtacat gcagataagt tttcgcaaac 3421 ctatttccat tttcttttgt aagcaaataa aactttaaaa caaaaaaaaa aaaaaaaaa //