LOCUS BC014597 1454 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens actin-related protein T1, mRNA (cDNA clone MGC:26590
IMAGE:4825563), complete cds.
ACCESSION BC014597
VERSION BC014597.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1454)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1454)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923075.
FEATURES Location/Qualifiers
source 1..1454
/db_xref="H-InvDB:HIT000036799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26590 IMAGE:4825563"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1454
/gene="ACTRT1"
/gene_synonym="AIP1"
/gene_synonym="ARIP1"
/gene_synonym="ARP-T1"
/gene_synonym="HSD27"
/gene_synonym="KIAA0705"
/gene_synonym="MGC26590"
/gene_synonym="RP1-203C2.1"
/db_xref="GeneID:139741"
/db_xref="HGNC:HGNC:24027"
/db_xref="MIM:300487"
CDS 196..1326
/gene="ACTRT1"
/gene_synonym="AIP1"
/gene_synonym="ARIP1"
/gene_synonym="ARP-T1"
/gene_synonym="HSD27"
/gene_synonym="KIAA0705"
/gene_synonym="MGC26590"
/gene_synonym="RP1-203C2.1"
/codon_start=1
/product="actin-related protein T1"
/protein_id="AAH14597.1"
/db_xref="GeneID:139741"
/db_xref="HGNC:HGNC:24027"
/db_xref="MIM:300487"
/translation="MFNPHALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKF
NVPLARLNQKYFVGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPS
QQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYASACVTGLVVDSGD
GVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEK
LCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLS
KMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASP
DRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF"
BASE COUNT 388 a 330 c 374 g 362 t
ORIGIN
1 agcggagata agattcagag gttgaggatg gggtgtcctg gtggactgaa ggtagcctac
61 tagctgtaca tgggtgacaa cttgaaactt cagaaccctg aagtttaaaa aattctaaag
121 gtgcctgtca tctcagagag tgacgtaagt gttctttctt tatttggggg aagtccagga
181 gaacatatta cagacatgtt taatccacat gcattagatg ttcctgctgt aatttttgac
241 aatggttcag gactctgcaa agcaggcctg tctggagaga ttggaccccg ccatgtcatc
301 agctccgtct tgggacattg taaattcaat gtgcctttag caagacttaa tcagaagtac
361 ttcgtggggc aagaagccct gtacaagtat gaggccctac atttgcacta ccccattgag
421 cgtggactgg taacaggatg ggatgacatg gagaaactct ggaaacatct ctttgagcgg
481 gagcttggag taaaacccag ccaacagcct gtacttatga ccgagccctc tttgaatcct
541 agggaaattc gagaaaagct agcagaaatg atgtttgaga ccttcagtgt gcctggtttc
601 tacctgtcta atcatgcggt ggcagcgctc tatgcctctg cctgtgtcac aggcctggtg
661 gtggacagtg gagatggggt cacttgcact gtccccatct ttgagggtta ctccctgcct
721 cacgcagtca ccaaactctg tatggcaggg agggacatca cagagcacct cacccggctc
781 ctctttgcta gcgggtttaa cttcccttgc atactcaaca aggccgtggt aaataacatc
841 aaagagaagt tgtgctacat cgccttggag ccagagaaag agctacgcaa gagccgggga
901 gaggtcctgg gagcatacag actgccagat ggacatgtca tccactttgg ggatgagctg
961 taccaagtgc ccgaggttct ttttgcacct gaccagctgg gcatccacag cccaggactc
1021 tcaaaaatgg tctccagcag catcatgaag tgtgacactg acatccagaa taaactttat
1081 gcagacattg tactctccgg gggcaccact ctcctccctg ggctggagga aaggctcatg
1141 aaggaagtgg aacagctggc ttccaaaggt actcccatca agatcacagc ttctcctgat
1201 agatgcttct ctgcatggat tggtgcatcc atcatgacct ctatgagcag tttcaagcag
1261 atgtgggtca cctcggcaga cttcaaggag tatgggacat ctgtggttca aagaaggtgc
1321 ttttaaagat ccttgagcag aggagacatc ttgaagtgtc agattacagg agtaccagtg
1381 ggagatggca ttttcttctg ggcttcagca tgatgttcaa taaaagtttt gccattccaa
1441 aaaaaaaaaa aaaa
//