LOCUS BC014409 1240 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens phosphopantothenoylcysteine decarboxylase, mRNA (cDNA
clone MGC:19897 IMAGE:4647763), complete cds.
ACCESSION BC014409
VERSION BC014409.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1240)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1240)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361899.
FEATURES Location/Qualifiers
source 1..1240
/db_xref="H-InvDB:HIT000036679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19897 IMAGE:4647763"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1240
/gene="PPCDC"
/gene_synonym="FLJ14585"
/gene_synonym="MDS018"
/db_xref="GeneID:60490"
/db_xref="HGNC:HGNC:28107"
/db_xref="MIM:609854"
CDS 71..685
/gene="PPCDC"
/gene_synonym="FLJ14585"
/gene_synonym="MDS018"
/codon_start=1
/product="phosphopantothenoylcysteine decarboxylase"
/protein_id="AAH14409.1"
/db_xref="GeneID:60490"
/db_xref="HGNC:HGNC:28107"
/db_xref="MIM:609854"
/translation="MEPKASCPAAAPLMERKFHVLVGVTGSVAALKLPLLVSKLLDIP
GLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAP
LDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFG
YVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVKEVLFQHSGFQQS"
BASE COUNT 313 a 321 c 356 g 250 t
ORIGIN
1 cctaaatccc gacagcttta tagagcccag gcctggcagg ctcccagaac ttgaagccac
61 cagaccccac atggaaccaa aggcctcctg tccagctgct gcacccttga tggagagaaa
121 attccatgtt cttgtgggtg tcacggggag tgtcgcagcc ctgaagttgc ctcttctggt
181 gtcaaagctt ttggacattc ctgggctgga agtagcagtg gtcacaactg agagagccaa
241 acatttctac agcccccagg acattcctgt caccctctac agcgacgctg atgaatggga
301 gatgtggaag agccgctctg acccagttct gcacattgac ctgcggaggt gggcagacct
361 cctgctggtg gctcctcttg atgccaacac tctggggaag gtggccagtg gcatctgtga
421 caacttgctt acctgcgtca tgcgggcctg ggaccgcagc aagcccctgc tcttctgccc
481 ggccatgaac accgccatgt gggagcaccc gatcacagcg cagcaggtag accagctcaa
541 ggcctttggc tatgtcgaga tcccctgtgt ggccaagaag ctggtgtgcg gagatgaagg
601 tctcggggcc atggctgaag tggggaccat cgtggacaaa gtgaaagaag tcctcttcca
661 gcacagtggc ttccagcaga gttgacctgg gatttctgtc atgggtgtcc ctctgtactc
721 agaatgggtt caggccaagt cggtgaagat ggatgttggc aaaataggag gataccctca
781 tttgctgaat gggggacctg ctctgagcct gcccaggggc caggcctgct ccaggttaaa
841 ctggacggaa ggcccaggtc tcagtttctt tcaaccagga gaggccgctg cctagagccc
901 ctccccacct tttcctggat gggtgaggca agccaggaga gcaagcagtg ttgtcctcac
961 gggaggaggg gtgagcgact gggaaaactc ggctctacat ctcacccaga acggctttta
1021 gaaacaccac agctggagag tcctggctga gccttgggag tttcagctct ttggcggggt
1081 gcccaggtgc catgcgatca gcgaagcctg cgagttggca ggactctgag gtttcctgca
1141 gaccatgcca tgagattgaa ggtgcgggga aataaagaaa aatcaccatt aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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