LOCUS BC014298 2162 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PRKR interacting protein 1 (IL11 inducible), mRNA
(cDNA clone MGC:14980 IMAGE:3940868), complete cds.
ACCESSION BC014298
VERSION BC014298.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC014298.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13375900.
FEATURES Location/Qualifiers
source 1..2162
/db_xref="H-InvDB:HIT000036624"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14980 IMAGE:3940868"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2162
/gene="PRKRIP1"
/gene_synonym="C114"
/gene_synonym="FLJ13902"
/db_xref="GeneID:79706"
/db_xref="HGNC:HGNC:21894"
CDS 35..589
/gene="PRKRIP1"
/gene_synonym="C114"
/gene_synonym="FLJ13902"
/codon_start=1
/product="PRKR interacting protein 1 (IL11 inducible)"
/protein_id="AAH14298.1"
/db_xref="GeneID:79706"
/db_xref="HGNC:HGNC:21894"
/translation="MASPAASSVRPPRPKKEPQTLVIPKNAAEEQKLKLERLMKNPDK
AVPIPEKMSEWAPRPPPEFVRDVMGSSAGAGSGEFHVYRHLRRREYQRQDYMDAMAEK
QKLYAEFQKRLEKNKIAAEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQ
GSSSSAEASGTEEEEEVPSFTMGR"
BASE COUNT 542 a 539 c 679 g 402 t
ORIGIN
1 cgccgccgct cgcttgtgaa actggaaggc tgccatggct agcccagccg cctcctcggt
61 gcgaccaccg aggcccaaga aagagccgca gacgctcgtc atccccaaga atgcggcgga
121 ggagcagaag ctcaagctgg agcggctcat gaagaacccg gacaaagcag ttccaattcc
181 agagaaaatg agtgaatggg cacctcgacc tcccccagaa tttgtccgag atgtcatggg
241 ttcaagtgct ggggccggca gtggagagtt ccacgtgtac agacatctgc gccggagaga
301 atatcagcga caggactaca tggatgccat ggctgagaag caaaaattgt atgcagagtt
361 tcagaaaaga ctggaaaaga ataaaattgc tgcagaggag cagaccgcaa agcgccggaa
421 gaagcgccag aagttaaaag agaagaaatt actggcaaag aagatgaaac ttgaacagaa
481 gaaacaagaa ggacccggtc agcccaagga gcaggggtcc agcagctctg cggaggcatc
541 tggaacagag gaggaggagg aagtgcccag tttcaccatg gggcgatgac aatgtttgcc
601 acagcctctg cctggaacct ggctcgtgct gtgaccagaa gggaaaggcg gctgtttggc
661 tctttctccc ccgcaaggac ccgctgaccc gctggatgga gagcaaagga gacccctccc
721 gagccgctca cagtcctgta tttggcaggt ttgggagcct gaggggccat ctccctgaca
781 ctcagaggca ctgccttgca gacaccatcc gtgctcctgg taaaggggga cagagagcct
841 caccttgcca catatttgaa cagtgatgag tttggggctg gtttctggga agggaacgtt
901 tatttagtaa agagcagaac acccttgcgt tttgttggga catgtggacc gtgagtcgca
961 aacactctgg agaaggctga gatgccacca ttcccacggg gactgaagac acattacgtg
1021 gacctggtcc caggctcagt gaggagatgg cctcagctgt ggggctggtc catgttgccc
1081 actcactcca gtgggaagtg gggaccacgc catagagggt ctgctcccac tgcagctccc
1141 ggtgctctcg tgttctggga aggcctgggt gtgtgcacaa ggaggcccgg gccagggact
1201 tcaccagggg ctgggtcaca agggcacagg gtgtgtggaa agcgctgtgg gggaagagcc
1261 ggtcaccgga gagtgagcag gcggagactc caagctgggc tgagccagag cagaaggcga
1321 gggattccca gccggacggg ggttctctca ccaacagctg tgatttcatc ccgaagtgga
1381 agggggtcta aacagaacag gctgagagag gcgggactgg gtcaagtggg tggagctcct
1441 ccttgcatga ctgcaactgt cggggctttc cgccggctca cagcagttgg ggccagcggg
1501 gagaagagag gcggaactgc tgtgtcctca tgtggcgcag cctcaaactg gcatccaggc
1561 actgggcccg tgcagagaag gcacctgcag agagcagggc agcccggcgc aggggcatgc
1621 gcctagaatc ccagctactc ggaaggccaa ggcaggagga ccgcttgagt ccagggattc
1681 aaggccaacc tgggcaatag agcgagaccc tgtctcttaa aaaacgatga tgatgaacac
1741 agaggacggg gcactgtgct gggagccagg gggcctggga ggagccgaga ccagcctttt
1801 acctcggggt tttgaggcca acagggacga cagagacagt ttctagttag agccttggct
1861 ccatttttgg atgatttagc cccgagttcc tgagtctatt ttacgcccct tacgtacttt
1921 gatagaacta aggaaatagt ggttttgagt gaagggaaag gaaacccaga aacattttac
1981 gttgctttta cttctgtagt gtagattgcc ccggcccctc tctgagccct gtagcatctg
2041 tgatagcttc tgtcccttca tcggttcatg tcacagggat tttctttccc aggaagcgga
2101 cacggagagt cagccctaat aaatgagcac atgccctggc tgtaaaaaaa aaaaaaaaaa
2161 aa
//