LOCUS BC014165 1329 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens GLI family zinc finger 4, mRNA (cDNA clone MGC:20886
IMAGE:4549240), complete cds.
ACCESSION BC014165
VERSION BC014165.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1329)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1329)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014165.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41152252.
FEATURES Location/Qualifiers
source 1..1329
/db_xref="H-InvDB:HIT000036557"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20886 IMAGE:4549240"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1329
/gene="GLI4"
/gene_synonym="HKR4"
/db_xref="GeneID:2738"
/db_xref="HGNC:HGNC:4320"
/db_xref="MIM:165280"
CDS 52..1182
/gene="GLI4"
/gene_synonym="HKR4"
/codon_start=1
/product="GLI family zinc finger 4"
/protein_id="AAH14165.1"
/db_xref="GeneID:2738"
/db_xref="HGNC:HGNC:4320"
/db_xref="MIM:165280"
/translation="MAALGDIQESPSVPSPVSLSSPGTPGTQHHEPQLHLHGHQHGSP
GSSPKVLSQPSDLDLQDVEEVEIGRDTFWPDSEPKPEQAPRSPGSQAPDEGAGGALRS
LLRSLPRRARCSAGFGPESSAERPAGQPPGAVPCAQPRGAWRVTLVQQAAAGPEGAPE
RAAELGVNFGRSRQGSARGAKPHRCEACGKSFKYNSLLLKHQRIHTGEKPYACHECGK
RFRGWSGFIQHHRIHTGEKPYECGQCGRAFSHSSHFTQHLRIHNGEKPYKCGECGQAF
SQSSNLVRHQRLHTGEKPYACSQCGKAFIWSSVLIEHQRIHTGEKPYECSDCGKAFRG
RSHFFRHLRTHTGEKPFACGACGKAFGQSSQLIQHQRVHYRE"
BASE COUNT 244 a 485 c 411 g 189 t
ORIGIN
1 ctcccgctcg gaaggtccca ggtgtgacac cttcagcagg tctcagggaa gatggcagcc
61 ctaggggaca ttcaggagtc cccttctgtc ccgtcccctg tcagtctctc atcaccgggg
121 acacctggaa cccagcacca cgagcctcag cttcacctcc atgggcatca acatggctcc
181 cctggctcca gccctaaggt gctctcccag ccgtccgacc tggatctcca agacgtagag
241 gaagtggaga tcggcagaga caccttctgg cccgactccg agcccaagcc ggagcaggct
301 ccacgctctc ctggctctca ggcccctgac gagggggcgg gcggggcgct gcgcagcctc
361 ctgaggagcc ttccccgcag ggcccggtgc agcgccggct tcgggcctga atccagcgcg
421 gagcggccgg cgggccagcc gcctggggcc gtcccttgcg cccagccgcg gggcgcctgg
481 cgcgtgacgc tcgtgcagca agcagcggct gggcccgagg gtgcgcccga gcgggctgcc
541 gagctgggag tcaacttcgg tcggagccgg cagggcagcg cgcggggggc caagccgcac
601 aggtgcgagg cctgcggcaa gagtttcaag tataactcgc tgctcctgaa gcaccagcgc
661 atccacacgg gcgagaagcc ctacgcctgc cacgagtgcg gcaagcgctt ccgcggctgg
721 tcgggcttca tccagcacca ccgcatccac acgggcgaga agccctacga gtgcggccag
781 tgcggccgcg ccttcagcca cagctcgcac ttcacgcagc acctgcgcat ccacaacggc
841 gagaagccct acaagtgcgg cgagtgcggc caggccttca gccagagctc caacctggtg
901 cgccaccagc ggctgcacac gggtgagaag ccctacgcct gcagccagtg cggcaaggcc
961 ttcatctgga gctccgtgct catcgagcac cagcgcatcc acactggcga gaagccctac
1021 gagtgctccg actgcggcaa agccttccgc ggccgctcgc acttcttccg gcacctgcgg
1081 acccacacgg gcgagaagcc cttcgcgtgt ggcgcctgcg gcaaggcctt cggccagagc
1141 tcccagctca tccagcacca gcgggtgcac taccgcgagt agccgggcgg gggctcgggg
1201 ctcggcctcc tacctgcccc caacccaccc tccaccccgt cccccacggt gggcactgcc
1261 cagcaccgca tgccacgtgt ccggaataaa ttctttttga ttgttggaaa aaaaaaaaaa
1321 aaaaaaaaa
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