LOCUS BC014128 1617 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens vacuolar protein sorting 26 homolog B (S. pombe), mRNA
(cDNA clone MGC:20744 IMAGE:4580029), complete cds.
ACCESSION BC014128
VERSION BC014128.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1617)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1617)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014128.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: k Column: 9.
FEATURES Location/Qualifiers
source 1..1617
/db_xref="H-InvDB:HIT000036533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20744 IMAGE:4580029"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1617
/gene="VPS26B"
/gene_synonym="Pep8b"
/db_xref="GeneID:112936"
/db_xref="HGNC:HGNC:28119"
/db_xref="MIM:610027"
CDS 444..1454
/gene="VPS26B"
/gene_synonym="Pep8b"
/codon_start=1
/product="vacuolar protein sorting 26 homolog B (S.
pombe)"
/protein_id="AAH14128.1"
/db_xref="GeneID:112936"
/db_xref="HGNC:HGNC:28119"
/db_xref="MIM:610027"
/translation="MSFFGFGQSVEVEILLNDAESRKRAEHKTEDGKKEKYFLFYDGE
TVSGKVSLALKNPNKRLEHQGIKIEFIGQIELYYDRGNHHEFVSLVKDLARPGEITQS
QAFDFEFTHVEKPYESYTGQNVKLRYFLRATISRRLNDVVKEMDIVVHTLSTYPELNS
SIKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIYFLLVRIKIKHMEIDIIKRETTGTG
PNVYHENDTIAKYEIMDGAPVRGESIPIRLFLAGYELTPTMRDINKKFSVRYYLNLVL
IDEEERRYFKQQEVVLWRKGDIVRKSMSHQAAIASQRFEGTTSLGEVRTPSQLSDNNC
RQ"
BASE COUNT 365 a 495 c 485 g 272 t
ORIGIN
1 gaagcgcctc ggtgcgttgc accgccggag gctgggcagc tcgcagcgct gctcggcgct
61 ggaccccacc cggcaggcgc aggccaccca cacccggctc tgtgcggctg ccccccgcag
121 cattgcacgg ccgaccctcg cccgcccact gccaccggcc gcgggactgg ctgggactgg
181 ctcggccgag ggcactgctc ctcggtgcat tgctgctcgg gcgccgcagc ccgcagccgc
241 cagcctcccc cggccgtgcc cctcccccgt ggagccggct gtccgtcggc gcccactgcc
301 cggcggcagc ggcggagcca ggcagccccg cggcggccga gcgcgctcgc gcatcgggcc
361 ctctggcctt ctttacctag ggcagcccgc gccccggtgc gagggagcgg tccttaccga
421 gacccgcccg gcccggcggt gcgatgagct tcttcggctt cgggcagagc gtggaggtgg
481 aaatccttct gaacgatgca gagagtagga agcgggccga gcacaagacg gaggacggga
541 agaaggagaa atatttcctc ttctacgacg gggagacggt ctccgggaag gtgagccttg
601 ccctcaagaa ccccaacaag cggctggagc accagggcat caagatcgag ttcatcgggc
661 agatcgaact ctactacgat cgcgggaacc accatgagtt tgtgtccctg gtgaaggacc
721 tggcccggcc tggagagatc acccagtcgc aggccttcga ctttgagttt acccacgtgg
781 agaagccgta tgagtcctac acagggcaga atgtgaagct acgctatttc cttcgtgcta
841 ccatcagccg ccgcctcaat gatgttgtca aagagatgga cattgtagtt cacacactca
901 gcacataccc agagctgaac tcttccatca agatggaggt tgggattgag gactgtctgc
961 acattgaatt tgagtacaat aaatccaaat accacttgaa agatgtcatt gtagggaaga
1021 tatacttcct gctggtgaga atcaaaatca agcacatgga gatagacatc atcaagcgag
1081 aaacgacggg tacaggcccc aacgtgtacc atgagaatga cacgatagcc aagtacgaga
1141 tcatggacgg ggcaccagtg cgaggagagt ccatcccgat ccggctcttc ctggccgggt
1201 atgagctcac gcccaccatg cgggacatca acaagaagtt ctctgtgcgc tattacctca
1261 acctggtgct gatagacgag gaggagcggc gctacttcaa gcagcaggaa gtggtgttgt
1321 ggcggaaggg tgacatcgta cggaagagca tgtcccacca ggcggccatc gcctcacagc
1381 gctttgaggg caccacctcc ctgggtgagg tgcggacccc cagccagctg tctgacaaca
1441 actgcaggca gtaggccccc agggccgaga agatgctggg cacccaccca gcacccccat
1501 ctaccaacac cagcggctgg gggcgggggc ggaccttgtg aggctcagtt gacccgttac
1561 ttgcaacctg aaaacaaatc atgtttttga cttaaaaaaa aaaaaaaaaa aaaaaaa
//