LOCUS BC014105 1958 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens isochorismatase domain containing 1, mRNA (cDNA clone
MGC:20632 IMAGE:4129769), complete cds.
ACCESSION BC014105
VERSION BC014105.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1958)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1958)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014105.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: c Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7705613.
FEATURES Location/Qualifiers
source 1..1958
/db_xref="H-InvDB:HIT000036522"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20632 IMAGE:4129769"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1958
/gene="ISOC1"
/gene_synonym="CGI-111"
/db_xref="GeneID:51015"
/db_xref="HGNC:HGNC:24254"
CDS 196..903
/gene="ISOC1"
/gene_synonym="CGI-111"
/codon_start=1
/product="isochorismatase domain containing 1"
/protein_id="AAH14105.2"
/db_xref="GeneID:51015"
/db_xref="HGNC:HGNC:24254"
/translation="MHRKFVVQLFAEEWGQYVDLPKGFAVSERCKVRLVPLQIQLTTL
GNLTPSSTVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIVTEQYPKGLG
STVQEIDLTGVKLVLPKTKFSMVLPEVEAALAEIPGVRSVVLFGVETHVCIQQTALEL
VGRGVEVHIVADATSSRSMMDRMFALERLARTGIIVTTSEAVLLQLVADKDHPKFKEI
QNLIKASAPESGLLSKV"
BASE COUNT 539 a 384 c 438 g 597 t
ORIGIN
1 gggaacatgg cggctgcgga gccggcggtc cttgcgctcc ccaacagcgg cgccgggggc
61 gcgggggcgc cgtcgggcac agtcccggtg ctcttctgtt tctcagtctt cgcgcgaccc
121 tcgtcggtgc cacacggggc gggctacgag ctgctcatcc agaagttcct cagcctgtac
181 ggcgaccaga tcgacatgca ccgcaaattc gtggtgcagc tgttcgccga ggagtggggc
241 cagtacgtgg acttgcccaa gggcttcgcg gtgagcgagc gctgcaaggt gcgcctcgtg
301 ccgttgcaga tccagctcac taccctggga aatcttacac cttcaagcac tgtgtttttc
361 tgctgtgata tgcaggaaag gttcagacca gccatcaagt attttgggga tattattagc
421 gtgggacaga gattgttgca aggggcccgg attttaggaa ttcctgttat tgtaacagaa
481 caatacccta aaggtcttgg gagcacggtt caagaaattg atttaacagg tgtaaaactg
541 gtacttccaa agaccaagtt ttcaatggta ttaccagaag tagaagcggc attagcagag
601 attcccggag tcaggagtgt tgtattattt ggagtagaaa ctcatgtgtg catccaacaa
661 actgccctgg agctagttgg ccgaggagtc gaggttcaca ttgttgctga tgccacctca
721 tcaagaagca tgatggacag gatgtttgcc ctcgagcgtc tcgctcgaac cgggatcata
781 gtgaccacga gtgaggctgt tctgcttcag ctggtagctg ataaggacca tccaaaattc
841 aaggaaattc agaatctaat taaggcgagt gctccagagt cgggtctgct ttccaaagta
901 taggacattt gaagaactgg tatgctactc actggtgaag gacagtcagg tgaaggactg
961 taagcccaca caagctcttc ttatctctac tagaattaaa atgttaagtc aaaaacggct
1021 ccttttttgc gcctcctagt gaaacttaac cagctagacc atttgagtac cagcatttag
1081 ttacaaacgt caaaggcttc cggtgctgct taccttcctt ttttgttaat gtgcttttat
1141 ttattaaaaa aaattacaat gaagatgcct gttttgtctc tactgtgtac tctgatcgta
1201 tctttccaaa gtgcagactc ttgtgaagtt ttcttaaatt gttcacttta aagaaaatga
1261 cgtaccaaca atgatttggc ttttatatta ctgtaagatg ttataatgtt aatgtggatg
1321 tagtgctttt actttacaga ttgattggaa taagattatt gcatatgaat ttacccacag
1381 gactctgaat catgttaccc actcccctca caatgttgtc cacttagtga gttgcattga
1441 tctatccgta ccaaatgatg ttgaataatt acatatcttt cttgactata ctgatttctt
1501 attttggtca ctattactaa atctctgtta atattctctc ttttaactga aaagggatgg
1561 gatagaaggg tttgcaatgc catattattg gtggagggct gttttaacat ctttgaagta
1621 tggcttgctg aatatcttta ccaacatctt gaatatatat tctagtgtcc acaagattta
1681 gcaaaaagat aaagcttggg tggaatatca ttttaaaatg ttcatgttct gttctatatt
1741 ttcttcacct actctccaaa tattgtaatg caaaaagtct cagtaatgat ttggtagtat
1801 taattttgtg gtcattgttt ctcttcgata aatttatttt cattaaatac ttgttagagg
1861 gttttgaaat gtttttcaaa tatgtgaaat gtgaaactgc tgtcttttat attaaagtaa
1921 ttaaagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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