LOCUS BC014091 1452 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 109, member A, mRNA
(cDNA clone IMAGE:4328993), complete cds.
ACCESSION BC014091
VERSION BC014091.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1452)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1452)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014091.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432055
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1452
/db_xref="H-InvDB:HIT000050588"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4328993"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1452
/gene="FAM109A"
/gene_synonym="FLJ32356"
/db_xref="GeneID:144717"
/db_xref="HGNC:HGNC:26509"
CDS 366..632
/gene="FAM109A"
/gene_synonym="FLJ32356"
/codon_start=1
/product="FAM109A protein"
/protein_id="AAH14091.1"
/db_xref="GeneID:144717"
/db_xref="HGNC:HGNC:26509"
/translation="MKLNERSLAFYATCDAPVDNAGFLYKKGGRHAAYHRRWFVLRGN
MLFYFEDAASREPVGVIILVAVALWPRALSVSPWWLSQGSPDTP"
BASE COUNT 238 a 488 c 432 g 294 t
ORIGIN
1 gtccggttgc tcccgcctcc ttccgtcgga tccgcgctct cccgcggctg cgccggcccg
61 gccgcccagg agacaaagcg ctgccgccgc cgtcgccgcc accgggccag tcccgaacca
121 tggccgggcc accccgcaac ctcgcgcctc ccgtcccgtc gccgccctag gcctgcgctg
181 cgagatgcag aaacagaggc ccagagagat gaatagcctg cctggggtcc cccagcccag
241 atgctgcaga gctgacattt gaatccagag aagagcgagc tgaggctgga gctgagcaga
301 gggcagggag gcaagtggtg gcctgagagg ccccaggctc ccctccaggc cccgcgattg
361 ccaccatgaa gctgaacgag cgcagcctgg ccttctacgc cacctgtgac gccccggtgg
421 acaatgcagg cttcctgtac aagaagggtg ggcggcacgc ggcctaccac cggcgctggt
481 tcgtgctgcg cgggaacatg ctcttctact tcgaggacgc tgccagccgt gagcccgtgg
541 gcgtcatcat cctggtggca gtggctctct ggccgcgggc cctgtctgtg tctccgtggt
601 ggctctcaca gggctctcca gacactcctt gactgcatcc ttcagtcttg gcccctgggc
661 ctggggcccc ttgggagctt gcctgacctc ccttcctggg ctgggtagcc atggcccgag
721 gtgaccttct agcaggttcc cccagggagg ggaggccacc agctgactca ccgcctagga
781 aggcccaggt gctgacctag tggcggagaa aaaacagccg cacaccgagt gtggcttcca
841 gagcccctct tcagctccag gcagccccct ctaacatgtc ccctcctgag ctcagccccc
901 acccccatac tcctggtggg gaccaggtct tgcttggctt cggggctgac cgccggtccc
961 ctttcttctc accacagtgc ccatttttca tccagggaga acctcggggc tgggacacct
1021 cctggccctc accctgggtc atgtttacag tcctcagtgc cccacaccgg tggccccctg
1081 aggacacctc caccctgacc ttgattttcc caaacgctgc ctcttggtga cagactcagc
1141 ccaaaacccc ttccttctgt ctctggagac ccttgagctt ggggaaatat ggaggggtgt
1201 gtgtctgcaa tcaaggcctc tgcagctcac ggctggcccg gtgggctggg acttccgtct
1261 gaattttaaa tacttagggt tcattttttt tttctctggc aacaaagctt gatgttttca
1321 ctgctttagt ttcctgtttg ctggtgggag gggatacggt ctgtgactct ggacttgctc
1381 tgggggaaca gttgtcactg cccccgggga gaggggcagc ttgggctgga gaagcacagc
1441 cagagacaga gc
//