LOCUS BC014031 2307 bp mRNA linear HUM 22-FEB-2007
DEFINITION Homo sapiens zinc finger with KRAB and SCAN domains 4, mRNA (cDNA
clone MGC:20459 IMAGE:4336904), complete cds.
ACCESSION BC014031
VERSION BC014031.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014031.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: n Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147476.
FEATURES Location/Qualifiers
source 1..2307
/db_xref="H-InvDB:HIT000036480"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20459 IMAGE:4336904"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2307
/gene="ZKSCAN4"
/gene_synonym="P1P373C6"
/gene_synonym="p373c6.1"
/db_xref="GeneID:387032"
/db_xref="HGNC:HGNC:13854"
CDS 245..1882
/gene="ZKSCAN4"
/gene_synonym="P1P373C6"
/gene_synonym="p373c6.1"
/codon_start=1
/product="zinc finger with KRAB and SCAN domains 4"
/protein_id="AAH14031.1"
/db_xref="GeneID:387032"
/db_xref="HGNC:HGNC:13854"
/translation="MAREPRKNAALDAQSAEDQTGLLTVKVEKEEASALTAEVRAPCS
PARGPERSRQRFRGFRYPEAAGPREALSRLRELCGQWLQPEMHSKEQILELLVLEQFL
TILPGNLQSWVREQHPESGEEVVVLLEYLERQLDEPAPQVPVGDQGQELLCCKMALLT
QTQGSQSSQCQPMKALFKHESLGSQPLHDRVLQVPGLAQGGCCREDAMVASRLTPGSQ
GLLKMEDVALTLTPGWTQLDSSQVNLYRDEKQENHSSLVSLGGEIQTKSRDLPPVKKL
PEKEHGKICHLREDIAQIPTHAEAGEQEGRLQRKQKNAIGSRRHYCHECGKSFAQSSG
LTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQRVHTGEKPYECEECGKVFSHSSNLI
KHQRTHTGEKPYECDDCGKTFSQSCSLLEHHKIHTGEKPYQCNMCGKAFRRNSHLLRH
QRIHGDKNVQNPEHGESWESQGRTESQWENTEAPVSYKCNECERSFTRNRSLIEHQKI
HTGEKPYQCDTCGKGFTRTSYLVQHQRSHVGKKTLSQ"
BASE COUNT 639 a 524 c 649 g 495 t
ORIGIN
1 ccaaagacat cctttggtga tacttactgt gggattcaga gtggggtgca gaggacgacc
61 ctgcaaaggc acggactata agagagatct gtgcagctgc gcctcagggg gtgtcctggg
121 cccctgggca tgacaggagg gggaccactt gcagttctac tggaaaattt accacccttc
181 cagaatcctc tgaagatata caggtcgcaa ctagagtgag acccgagtac tgccttgggt
241 cagaatggct agagaaccga gaaaaaacgc agccctggac gcccagtctg cagaagacca
301 gacggggctc ctgaccgtga aggtggagaa ggaggaagcc tccgccttga cggcggaggt
361 gagagcaccc tgcagccctg ctcggggccc cgaacgctcc cgccagcgct tccgaggctt
421 ccgctacccg gaggctgcgg gcccccgcga ggcgttgagc cggctccgag aactctgcgg
481 acaatggctg cagcctgaga tgcacagcaa ggagcagatc ctggagctgc tggtgctgga
541 gcagttcctg accatcctgc cggggaatct gcagagctgg gtgcgggagc agcatccaga
601 gagcggggag gaggtggtgg tgctattgga gtatttggag aggcagctgg atgagccggc
661 gccgcaggtt cccgttggtg accaggggca agaactgctc tgttgcaaga tggcactatt
721 gacacaaact caagggtctc aaagtagcca gtgccagcca atgaaggctc tgttcaagca
781 tgaatctctg ggatcccagc ccttacacga tagagttctc caggttcctg ggcttgccca
841 gggagggtgc tgcagagaag atgcaatggt agcttccagg ctcactccag ggtcccaggg
901 tttgctgaaa atggaagatg tggccctgac cctcactcct gggtggacac agctggattc
961 atctcaggtg aacctctaca gagatgaaaa gcaggagaac catagcagcc tggtctccct
1021 tggtggtgaa atacagacta agagcaggga cttgcctcca gtcaagaagc ttccagaaaa
1081 ggagcatggg aagatatgcc acctgaggga agacattgcc cagattccta cacatgcaga
1141 agctggtgaa caggagggca ggttacaaag aaagcagaaa aatgccatag ggagtaggcg
1201 acattattgc catgaatgtg gaaagagttt tgctcaaagt tcaggcctga ctaaacacag
1261 gagaatccac actggtgaga aaccctatga atgtgaagac tgtggaaaga ccttcattgg
1321 gagctctgcc cttgtcattc atcagagagt ccacactggt gagaagccat atgagtgtga
1381 agaatgtggt aaggtcttca gtcacagctc aaaccttatc aaacaccaga gaacccacac
1441 tggggagaag ccctatgagt gtgatgactg tgggaagacc ttcagccaga gctgcagcct
1501 ccttgaacat cacaaaattc atactgggga gaagccatac cagtgcaata tgtgtggcaa
1561 agcctttagg cggaattcac atctcctgag acatcagagg attcatggtg ataaaaatgt
1621 tcagaatcct gagcacgggg agtcctggga aagtcagggt aggacggaaa gccagtggga
1681 aaatactgag gctcccgtgt cttataaatg taatgagtgt gagagaagtt tcacacggaa
1741 tagaagtctt attgaacatc agaaaatcca cactggtgag aaaccctatc agtgtgacac
1801 atgtggaaaa ggtttcactc gaacttcata ccttgttcaa catcagagaa gccatgtagg
1861 gaaaaaaact ctttcacagt gacccatggt attcatgcca acattggtgc tcatttgtca
1921 ctgaactgaa gccaccctgg agcccttaat ggttacagaa attgtggacc agggctttat
1981 ttaccactat acatcatcgg gtattagaaa atgtagtctg gctgagacga tgagttatct
2041 tctacattct agaaagtgat tggaagaagt catttgataa gaggccatgg gagagtggtc
2101 tggaagttgt aggacctaaa atagtttgtt ctcacccagt gtatttaaat ggccttctgg
2161 acttgttaat tgccctcagc cagcacttta ggacatctgg ttggatggct ctgatgtggg
2221 gggctgctgc tctgaccatt cattttgcct ctaatgaatc tttcacaaat tggtcagatc
2281 catgagaaaa aaaaaaaaaa aaaaaaa
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