LOCUS BC014005 1310 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens ribosomal RNA processing 1 homolog B (S. cerevisiae),
mRNA (cDNA clone IMAGE:3839957), partial cds.
ACCESSION BC014005
VERSION BC014005.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1310)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1310)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014005.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57863268.
FEATURES Location/Qualifiers
source 1..1310
/db_xref="H-InvDB:HIT000088250"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3839957"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1310
/gene="RRP1B"
/gene_synonym="Nnp1"
/gene_synonym="RRP1"
/db_xref="GeneID:23076"
/db_xref="HGNC:HGNC:23818"
/db_xref="MIM:610654"
CDS 87..>1310
/gene="RRP1B"
/gene_synonym="Nnp1"
/gene_synonym="RRP1"
/codon_start=1
/product="RRP1B protein"
/protein_id="AAH14005.1"
/db_xref="GeneID:23076"
/db_xref="HGNC:HGNC:23818"
/db_xref="MIM:610654"
/translation="MAPAMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETG
GFSQEELLKIWKGLFYCMWVQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQTFWQTM
NREWKGIDRLRLDKYYMLIRLVLRQSFEVLKRNGWEESRIKVFLDVLMKEVLCPESQS
PNGVRFHFIDIYLDELSKVGGKELLADQNLKFIDPFCKIAAKTKDHTLVQTIARGVFE
AIVDQSPFVPEETMEEQKTKVGDGDLSAEEIPENEVSLRRAVSKKKTALGKNHSRKDG
LSDERGRDDCGTFEDTGPLLQFDYKAVADRLLEMTSRKNTPHFNRKRLSKLIKKFQDL
SEGSSISQLSFAEDISADEDDQILSQGKHKKKGNKLLEKTNLEKEKGSRVFCVEEEDS
ESSPQKKKKKKKKKKK"
BASE COUNT 402 a 287 c 356 g 265 t
ORIGIN
1 gcggacggtg gctggctgct ccgcagcgct cggctggctg cagcggcacc gcgggttgcg
61 cggccgggga tgctccagcg ggcgcgatgg cccccgccat gcagccggcc gagatccaat
121 ttgcccagcg gctggcgtcc agcgagaagg gcatccggga ccgagcggtg aagaagctgc
181 gccagtacat cagcgtgaag acgcagaggg agacaggagg tttcagtcag gaagaacttc
241 tgaaaatctg gaaggggctc ttctactgca tgtgggtgca ggatgaaccc cttctacagg
301 aagagctcgc caacaccatt gcacagctag tccatgctgt taacaactca gcggctcaac
361 acctgttcat tcagaccttt tggcaaacca tgaatcgaga atggaaagga atagacaggc
421 tacgcctgga caaatactat atgctgattc gtctggtcct gaggcagtcc tttgaagtct
481 tgaagcgaaa tggctgggaa gaaagccgaa tcaaggtttt cttggatgtc ctgatgaagg
541 aggtcctgtg tcctgagagt cagtctccta atggagtgag attccacttc attgatattt
601 acctggatga actctccaaa gtcgggggga aggagctttt agcagatcag aatctcaagt
661 ttatcgatcc attctgcaaa attgctgcaa agacgaagga ccacaccctg gtacagacca
721 tagctcgggg tgtcttcgaa gctatcgtag atcagtctcc ttttgtgcct gaagagacga
781 tggaggaaca gaagacaaaa gtgggtgatg gtgacctctc tgctgaggag atacctgaaa
841 atgaggtatc cttgagaaga gctgtcagta aaaagaagac agcactgggc aaaaaccatt
901 ccagaaaaga tggactcagt gatgaaagag gaagagatga ctgtggaacc tttgaggaca
961 cagggcccct tctccagttt gactataagg ctgttgctga tcgactcctg gaaatgacca
1021 gcaggaagaa cacgccccac ttcaacagga agcgcctctc caaactcatc aagaaattcc
1081 aagacctttc tgaaggaagc agtatatctc aactcagttt tgcggaggac atttctgctg
1141 atgaagatga ccaaatcctc agtcaaggaa agcataagaa gaaaggaaat aaacttttag
1201 agaaaactaa cttggaaaag gagaaaggaa gcagagtctt ttgtgtagag gaagaggaca
1261 gtgaaagcag tcctcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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