LOCUS BC014004 1629 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens WD repeat and FYVE domain containing 2, mRNA (cDNA
clone MGC:20275 IMAGE:3842589), complete cds.
ACCESSION BC014004
VERSION BC014004.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1629)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1629)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC014004.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: f Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18379351.
FEATURES Location/Qualifiers
source 1..1629
/db_xref="H-InvDB:HIT000036463"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20275 IMAGE:3842589"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1629
/gene="WDFY2"
/gene_synonym="RP11-147H23.1"
/gene_synonym="WDF2"
/gene_synonym="ZFYVE22"
/db_xref="GeneID:115825"
/db_xref="HGNC:HGNC:20482"
/db_xref="MIM:610418"
CDS 181..1383
/gene="WDFY2"
/gene_synonym="RP11-147H23.1"
/gene_synonym="WDF2"
/gene_synonym="ZFYVE22"
/codon_start=1
/product="WD repeat and FYVE domain containing 2"
/protein_id="AAH14004.1"
/db_xref="GeneID:115825"
/db_xref="HGNC:HGNC:20482"
/db_xref="MIM:610418"
/translation="MAAEIQPKPLTRKPILLQRMEGSQEVVNMAVIVPKEEGVISVSE
DRTVRVWLKRDSGQYWPSVYHAMPSPCSCMSFNPETRRLSIGLDNGTISEFILSEDYN
KMTPVKNYQAHQSRVTMILFVLELEWVLSTGQDKQFAWHCSESGQRLGGYRTSAVASG
LQFDVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGS
SDHSVIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWNMDVERQ
ETPEWLDSDSCQKCDQPFFWNFKQMWDSKKIGLRQHHCRKCGKAVCGKCSSKRSSIPL
MGFEFEVRVCDSCHEAITDEERAPTATFHDSKHNIVHVHFDATRGWLLTSGTDKVIKL
WDMTPVVS"
BASE COUNT 428 a 401 c 451 g 349 t
ORIGIN
1 gaagcaggga gcgcggagtc gttcccgaga gaggcggcca ggctatgctc gccggtttcc
61 ggcgttccgc tccggccagc cagagtctct gtctcaacct gtgtccgtgc tccagcagtc
121 tcctcagccc ggccccgcgg cgcggttggc ggcggcgccc caggcgcgcc ccctcctccg
181 atggcggcgg agatccagcc caagcctctg acccgcaagc cgatcctgct gcagcggatg
241 gaggggtccc aggaggtggt gaatatggcc gtgatcgtgc ccaaagagga gggcgtcatc
301 agcgtctccg aggacaggac agttcgtgtt tggttaaaga gagacagtgg acagtattgg
361 ccaagcgtat accatgcaat gccttctcca tgttcatgca tgtcttttaa cccggaaaca
421 agaagactgt ccataggtct agacaatggt acaatctcag agtttatatt gtcagaagat
481 tataacaaga tgactcctgt gaaaaactat caagcgcatc agagcagagt gacgatgatc
541 ctgtttgtcc tggagctgga gtgggtgctg agcacaggac aggacaagca atttgcctgg
601 cactgctctg agagtgggca gcgcctggga ggttatcgga ccagtgctgt ggcctcaggc
661 ctgcaatttg atgttgaaac ccggcatgtg tttatcggtg accactcagg ccaagtaaca
721 atcctcaaac tggagcaaga aaactgcacc ctggtcacaa cattcagagg acacacaggt
781 ggggtgaccg ctctctgttg ggacccagtc cagcgggtgt tgttctcagg cagttcagat
841 cactctgtca tcatgtggga catcggtggg agaaaaggaa cagccatcga gctccaagga
901 cacaacgaca gagtccaggc cctctcctat gcacagcaca cgcgacaatt gatctcctgt
961 ggcggtgatg gtgggattgt cgtctggaac atggacgtgg agaggcagga gacccctgaa
1021 tggttggaca gtgattcctg ccaaaagtgt gatcagcctt tcttctggaa cttcaagcaa
1081 atgtgggaca gtaagaaaat tggtctaaga cagcaccact gccgcaagtg tgggaaggcc
1141 gtctgtggca agtgcagctc caagcgctcc tccatccccc tgatgggctt cgagtttgaa
1201 gtgagggtct gtgacagctg ccacgaggcc atcacagatg aagaacgtgc acccacagcc
1261 accttccatg acagtaaaca taacattgtg catgtgcatt tcgatgcaac cagaggatgg
1321 ttactgactt ctggaactga caaggttatt aagttgtggg atatgacccc agtcgtgtct
1381 tgatgactct cccaggaatc agaaagatag tatttactaa agaaacggtt gttttaaccc
1441 aaatcattac cagagtggta aagcagacat gtgagaagta agaaagaaac taaagaccct
1501 gaatgaattt gcagattacc catgtgcaca gtggggacct ggccagtgag cactcgcaag
1561 gggactcttc caacttgttc atacaatata aaagaagcta tttttttaac aaaaaaaaaa
1621 aaaaaaaaa
//