LOCUS BC013973 1370 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast), mRNA (cDNA clone MGC:12555 IMAGE:4137664), complete cds. ACCESSION BC013973 VERSION BC013973.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1370) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1370) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: k Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37577121. FEATURES Location/Qualifiers source 1..1370 /db_xref="H-InvDB:HIT000036437" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12555 IMAGE:4137664" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1370 /gene="UBE2J1" /gene_synonym="CGI-76" /gene_synonym="HSPC153" /gene_synonym="HSPC205" /gene_synonym="HSU93243" /gene_synonym="MGC12555" /gene_synonym="NCUBE1" /gene_synonym="Ubc6p" /db_xref="GeneID:51465" /db_xref="HGNC:HGNC:17598" CDS 294..1250 /gene="UBE2J1" /gene_synonym="CGI-76" /gene_synonym="HSPC153" /gene_synonym="HSPC205" /gene_synonym="HSU93243" /gene_synonym="MGC12555" /gene_synonym="NCUBE1" /gene_synonym="Ubc6p" /codon_start=1 /product="ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)" /protein_id="AAH13973.1" /db_xref="GeneID:51465" /db_xref="HGNC:HGNC:17598" /translation="METRYNLKSPAVKRLMKEAAELKDPTDHYHAQPLEDNLFEWHFT VRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETW QPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCGSAMKDVL LPLKSGSDSSQADQEAKELARQISFKAEVNSSGKTISESDLNHSFSLTDLQDDIPTTF QGATASTSYGVQNSSAASFHQPTQPVAKNTSMSPRQRRAQQQSQRRLSTSPDVIQGHQ PRDNHTDHGGSAVLIVILTLALAALIFRRIYLANEYIFDFEL" BASE COUNT 396 a 350 c 340 g 284 t ORIGIN 1 aggtgacctc cagcccgggc gcccggttca gcgccgcccc ggccggcgcc ggtgcctgcc 61 aggcactcag ggaggcgggg gcgcagtgga ggaggcggcg ccatcgcgaa gcgagcgcct 121 cgcccgcact cagccttgcc accccgcccg cagtccaggc tggactgggc ggcatttgcc 181 gaggctcctc ggccaggccc cgtccgcccg agccgcgctg agacccgggc agcggccgcg 241 tggagaggag gtggcagcgg cccgggaggc cggagccaag ccagcgaccc accatggaga 301 cccgctacaa cctgaagagt ccggctgtta aacgtttaat gaaagaagcg gcagaattga 361 aagatccaac agatcattac catgcgcagc ctttagagga taaccttttt gaatggcact 421 tcacggttag agggccccca gactccgatt ttgatggagg agtttatcac gggcggatag 481 tactgccacc agagtatccc atgaaaccac caagcattat tctcctaacg gctaatggtc 541 gatttgaagt gggcaagaaa atctgtttga gcatctcagg ccatcatcct gaaacttggc 601 agccttcgtg gagtataagg acagcattat tagccatcat tgggtttatg ccaacaaaag 661 gagagggagc cataggttct ctagattaca ctcctgagga aagaagagca cttgccaaaa 721 aatcacaaga tttctgttgt gaaggatgtg gctctgccat gaaggatgtc ctgttgcctt 781 taaaatctgg aagcgattca agccaagctg accaagaagc caaagaactg gctaggcaaa 841 taagctttaa ggcagaagtc aattcatctg gaaagactat ctctgagtca gacttaaacc 901 actctttttc actaactgat ttacaagatg atatacctac aacattccag ggtgctacgg 961 ccagtacatc gtacggagtc cagaattcct cagcagcatc ctttcatcaa cctacccaac 1021 ctgtagctaa gaatacctcc atgagccctc gacagcgccg ggcccagcag cagagtcaga 1081 gaaggttgtc tacttcacca gatgtaatcc agggccacca gccaagagac aaccacactg 1141 atcatggtgg gtcagctgta ctgattgtca tcctgacttt ggcattggca gctcttatat 1201 tccgacgaat atatctggca aacgaataca tatttgactt tgagttataa tatggttttg 1261 tgacttatga gctgtgactc aactgcttca ttaaacattc tgcattgggt ataatctaaa 1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //