LOCUS BC013962 2289 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 187, mRNA (cDNA clone MGC:4488
IMAGE:2963683), complete cds.
ACCESSION BC013962
VERSION BC013962.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2289)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013962.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66932937.
FEATURES Location/Qualifiers
source 1..2289
/db_xref="H-InvDB:HIT000036429"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4488 IMAGE:2963683"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2289
/gene="ZNF187"
/gene_synonym="MGC2815"
/gene_synonym="SRE-ZBP"
/db_xref="GeneID:7741"
/db_xref="HGNC:HGNC:12978"
CDS 184..1161
/gene="ZNF187"
/gene_synonym="MGC2815"
/gene_synonym="SRE-ZBP"
/codon_start=1
/product="zinc finger protein 187"
/protein_id="AAH13962.1"
/db_xref="GeneID:7741"
/db_xref="HGNC:HGNC:12978"
/translation="MAPLKGVQEQQVRHECEVTKPEKEKGEETRIENGKLIVVTDSCG
RVESSGKISEPMEAHNEGSNLESHQAKPKEKIEYKCSEREQRFIQHLDLIEHASTHTG
KKLCESDVCQSSSLTGHKKVLSREKGHQCHECGKAFQRSSHLVRHQKIHLGEKPYQCN
ECGKVFSQNAGLLEHLRIHTGEKPYLCIHCGKNFRRSSHLNRHQRIHSQEEPCECKEC
GKTFSQALLLTHHQRIHSHSKSHQCNECGKAFSLTSDLIRHHRIHTGEKPFKCNICQK
AFRLNSHLAQHVRIHNEEKPYQCSECGEAFRQRSGLFQHQRYHHKDKLA"
BASE COUNT 734 a 471 c 494 g 590 t
ORIGIN
1 cggcgatgag ctaagacgct gtttcagagc gtttgggtcc tctgaggccc cttgaccagg
61 agtgtctctg aagatacagt ccaaagaaag ttctccaaaa caaggagaac agtctgaagc
121 tggggatggc aacagcattg gacccagacc agccaaagaa acaaaaaaat acttgtggag
181 gagatggccc ctctgaaagg agtacaggaa cagcaggttc ggcatgagtg tgaagttaca
241 aagcctgaga aagagaaggg tgaggagaca aggattgaga atgggaagct tattgtagta
301 acagactctt gtggaagagt agagtcatct gggaaaatat ctgaacccat ggaggctcat
361 aatgagggct ctaacttgga aagtcatcag gccaagccca aagagaagat tgagtataaa
421 tgctcagaac gtgagcagag attcatccag cacttggacc tgattgaaca tgcgagtaca
481 cacacgggaa agaaactctg cgagtctgat gtgtgtcaga gttccagtct tacaggacat
541 aagaaagtcc tctctagaga gaaaggtcat cagtgtcatg agtgtgggaa agcctttcag
601 aggagttcac acctcgtcag acatcagaaa atccatcttg gtgagaagcc ttatcagtgc
661 aatgagtgtg gcaaagtctt tagccagaat gcaggccttt tggaacatct cagaattcat
721 actggagaga aaccttatct atgtatccat tgtggaaaaa attttaggcg cagctctcac
781 cttaatcgac atcagagaat tcacagtcag gaggagccct gtgagtgcaa ggagtgtgga
841 aaaaccttta gtcaggcctt actcctcacc caccatcaga gaatccatag tcactccaaa
901 agccatcaat gtaacgagtg tggaaaagct ttcagtttga cctcagacct tattcgacac
961 cacagaattc atactggaga aaaacctttc aagtgtaaca tatgccagaa agccttccga
1021 ctaaactcac accttgctca gcatgtaaga atccacaatg aagaaaaacc ctatcagtgt
1081 agtgaatgtg gagaagcctt caggcaaagg tcaggtcttt ttcaacatca gagatatcac
1141 cacaaagaca aactggcttg atgaggtgtt ctctccttgt agaacatcag agaaggcaca
1201 ttgactagca aacagcactt taggaaaagt caccgtagcc cactgtggca tcagaaaatt
1261 cttgggggct gagttggagg ctccctgcct ctattctctc tcctttgctt tccttgaagt
1321 cagctttgga ccacaataat ttcactgtag atgatatgct aggatcaaag ttaaacagca
1381 ttcttcactg caggacatct cagagcatgt aacataactg catgattata tactctaagc
1441 aatagagagc ttcatgactg agtaagagtt ttgaagtcag cagtgaatca agtgcccaca
1501 gatttgcagg cttaagcaga acaagggaag attgatattt ttggatatgc tatagcagct
1561 ttctcctatg aaataaaact gatgatgttt ggaagtatac tactctcaaa ggtgtcttta
1621 aagtacaggt taatggtgaa cattttcccc cagtggcttc acctcattcc tcccactggc
1681 cttacccctt ccttccccag tggaagcatt ttcaaaagca aagataattt tcgctggtga
1741 acttcagaac ttgccttcag ggttagcttc atgtaatttt accatttccc atccccattc
1801 cccaccacat tatgtcaaga ttcaagttat aaattaacgt tttacttaga ctttgaaaga
1861 gatttcatga gtaatttgaa tgaaccttgc tgaattaatc tgaatagcaa ctgtctgact
1921 tgataactcc agtgccagta tagtggctgc tgcatagaca ctattcagta aatgtctgat
1981 gaaagaaatt ggactttttc cctttaatac tgatgatgca attttgaaat gttgcttgtt
2041 ctggaatact tcggaagtta aacaataaag tcagcttgga gaggagatca tgatctttat
2101 actgtgaata gcagaatgtc acagatgaag aatattaaaa ttaggggcgt ccactccaaa
2161 acatatcacc agagtgacaa cttcagccct cagcctctgc aatccatata tatcctggtc
2221 ttgggagtcc atagaatact gtttccttct aataaaggtt tcaaacaaaa aaaaaaaaaa
2281 aaaaaaaaa
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