LOCUS BC013789 2527 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nescient helix loop helix 1, mRNA (cDNA clone MGC:17696 IMAGE:3866861), complete cds. ACCESSION BC013789 VERSION BC013789.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2527) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2527) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: f Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923328. FEATURES Location/Qualifiers source 1..2527 /db_xref="H-InvDB:HIT000036367" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17696 IMAGE:3866861" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2527 /gene="NHLH1" /gene_synonym="NSCL" /gene_synonym="NSCL1" /db_xref="GeneID:4807" /db_xref="HGNC:HGNC:7817" /db_xref="MIM:162360" CDS 430..831 /gene="NHLH1" /gene_synonym="NSCL" /gene_synonym="NSCL1" /codon_start=1 /product="nescient helix loop helix 1" /protein_id="AAH13789.1" /db_xref="GeneID:4807" /db_xref="HGNC:HGNC:7817" /db_xref="MIM:162360" /translation="MMLNSDTMELDLPPTHSETESGFSDCGGGAGPDGAGPGGPGGGQ ARGPEPGEPGRKDLQHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLL PTLPPDKKLSKIEILRLAICYISYLNHVLDV" BASE COUNT 486 a 804 c 606 g 631 t ORIGIN 1 ggtgtgtgtg tgagtgtggc tggccccagt acctggccaa gcccaccact tccacctggg 61 ccctacaccc ccacaatgtg tacccctctt atctgccctg gagcctgtac agccatgcca 121 cgctacccct gagagtctag aaagctggtc actaactttg cagacggatg agccttgagc 181 acccagagga gactggggct gtcaacgctg ccccttgtcc tgccggcttg gatcccctga 241 cagggtcctt ctaggcttca gactggcacc ctgaccatgg aaccctgaag tggcagtgac 301 ttctagagct cagtggcaga ccccacgacc cttcctcccc cttcctcccc ctcccaccac 361 cagctttcaa gctcccagag ggaggggtgg ggaggggatc ctgatctcac agggcagggg 421 gcttccatca tgatgctcaa ctcagacacc atggagctgg acctgccgcc cacccactca 481 gagactgagt cgggcttcag tgactgtggg ggcggggcgg gccctgatgg tgccgggcct 541 gggggtccgg gagggggcca ggcccgaggc ccagagccgg gagagcctgg ccggaaagac 601 ctgcagcatc tgagccgcga ggagcgccgg cgccggcgcc gcgccacagc caagtaccgc 661 acggcccacg ccacgcgaga acgcatccgc gtggaagcct tcaacctggc cttcgccgag 721 ctgcgcaagc tgctgcctac gctgcccccc gacaagaagc tctccaagat tgagattctg 781 cgcctggcca tctgctatat ctcctacctg aaccacgtgc tggacgtctg aactcagcct 841 gtctcccacc tcccgggcct ctctggggcc cctttccacc gctcactgct tagaaaggcc 901 gcatcctccc cgagccctta taccttggca tggagtccca aaggccctgg gcacaggcag 961 agagcccacc ggctggtcat gagggcctct tcctttctct gacccaggca cctcgagggc 1021 tattctcctg ggttccttcc ggggtttatt gctgaggccc agctgtgcag aattgtttgc 1081 tagtgtggtt ggtatggaat ccttgctggc tttactaagc cagccacact tggagtctgc 1141 ccccaagctc tctcactgaa tgctgcctct tctaccccta tgtccaaatt ttcagccacc 1201 acagacctca gctgtgtatc ctatctgttc tagcttctcc tgcccctggt ggggatgggc 1261 tgtcagaatt gcaagggagg aaggctgggg ttagagtggg gagtgggctt cttcctccaa 1321 gatctcagtc tctcagtgct tggcagaggg gtgaggccct ggggaggcag gggttggtgc 1381 cctgactcct gtgaggggaa tctcagtagc tgggaattat ggaaaaactc ttcctgtttc 1441 tgtccatctt gttcctgtgg cttagcacat acagacctca gatcttactt ggtagtgagt 1501 gccttgccct ctttgagcta tttggctact tccctgtccc tctgactcct actgtcccaa 1561 ttttctccct ccctgtgtgt cactagagaa aaaaaaaaac aaaaacctag attccggatt 1621 aggggatgac atcccaaaca gcccggagta tttgcagaag gctcaggcaa cgagtgggcc 1681 acatctcact tctgcttcct catctcagcc cactctgaaa atgtgcagca ccctcactgg 1741 ttcctccccc caacgcaagg aggatgccca attgttgccc tctaaaaatg cacagttctc 1801 ctggccctag gacttactta ttacattttt ttctctttcc ttgagctgcc tttggcaagg 1861 gaagagaccc ccaactctgc gcccctactc catgctgctg atccccacct gcgcactata 1921 gcgcagggtc agcagtggaa tgaagggcct tagaacctgc atagaagaaa tgaactcact 1981 gcatttctgt gctccctcct ccctcgcacc aaactcctag ctctacaagt atatttattt 2041 atttatttat ttattcatct atttatttac ttatttattt atttatttat aaatattgct 2101 atttattgcc gagttgtgca ctttggggta gagtgagggg ctcccagcag ctctagctgg 2161 gtctctcttg cttcctccct gcttacgcct ttccttttct tgctccttct tcaactcctg 2221 gtgtgtgtga gcatgccctt tgcttgccac accatatcct ttccccagat ccacctgtcc 2281 tgacactcta gtcctccagg atagtgctcc tcccccagct ccagggctcc tggatgtcct 2341 tcctcaactc cctccacccc tagacaatcc tacctggtcc catctgcctc ttttctctcc 2401 ccagcctgcc ctgtgaccct tgcctcttcc tgatactccc aagagcaggc cccaggggtc 2461 tgtgtcacat atctctgtgt gattccttct ggttgcatcc ccaatttcat acaaaaaaaa 2521 aaaaaaa //