LOCUS BC013756 2401 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase, short/branched chain,
mRNA (cDNA clone MGC:21286 IMAGE:4706281), complete cds.
ACCESSION BC013756
VERSION BC013756.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2401)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2401)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: l Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38373685.
FEATURES Location/Qualifiers
source 1..2401
/db_xref="H-InvDB:HIT000036351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21286 IMAGE:4706281"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2401
/gene="ACADSB"
/gene_synonym="2-MEBCAD"
/gene_synonym="ACAD7"
/gene_synonym="SBCAD"
/db_xref="GeneID:36"
/db_xref="HGNC:HGNC:91"
/db_xref="MIM:600301"
CDS 13..1311
/gene="ACADSB"
/gene_synonym="2-MEBCAD"
/gene_synonym="ACAD7"
/gene_synonym="SBCAD"
/codon_start=1
/product="acyl-Coenzyme A dehydrogenase, short/branched
chain"
/protein_id="AAH13756.1"
/db_xref="GeneID:36"
/db_xref="HGNC:HGNC:91"
/db_xref="MIM:600301"
/translation="MEGLAVRLLRGSKLLRRNFLTCLSSWKIPPHVSKSSQSEALLNI
TNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGL
MGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKA
TYLPQLTTEKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFL
VMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANIL
GQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQH
QVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGV
GYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY"
BASE COUNT 737 a 440 c 519 g 705 t
ORIGIN
1 cctgcggcga ggatggaggg cctggcagtg cggttgctgc gcggcagcaa gctgctaaga
61 agaaatttcc tgacttgttt gtcttcttgg aagattcctc ctcatgtctc aaaatcttcc
121 cagtcagaag ctctactcaa tataacaaat aatggaatac actttgctcc cctgcaaaca
181 tttacagatg aggaaatgat gataaagagt tcagttaaaa aatttgctca ggaacaaatt
241 gcacctttgg tttcaaccat ggatgaaaat tcgaaaatgg agaaatcagt aatacaagga
301 ttatttcaac aagggttgat gggtattgaa gttgacccag aatatggagg cacaggagct
361 tcatttttat ccactgtgct cgtgatagag gaattagcca aagttgatgc atctgtggct
421 gtcttttgtg agatccagaa cacattaatt aacacactga ttagaaaaca tggaacagaa
481 gaacaaaagg ccacctattt gcctcagctc actacagaaa aagtaggaag tttctgcctt
541 tcagaggctg gagcaggtag tgactcattt gctttgaaga ccagagctga taaagaggga
601 gattattatg tcctcaatgg atcaaagatg tggatcagca gtgctgagca cgcagggctc
661 tttctggtga tggcaaatgt agaccctacc attggatata agggaattac ctccttctta
721 gtagatcgtg atactccggg ccttcatata gggaaacctg aaaacaaatt ggggctcaga
781 gcttcttcca cctgcccgtt aacattcgaa aatgtcaagg ttccagaagc caatatcttg
841 ggacaaattg gacatggcta taagtatgcc atagggagtc tcaatgaagg tagaatagga
901 attgctgcac agatgctggg actggcgcaa ggatgttttg actacactat tccatatatt
961 aaagaaagga tacaatttgg caaaagacta tttgattttc agggcctcca acaccaagtg
1021 gctcacgtgg ccacccagct ggaagctgca agattactaa catacaatgc tgctaggctt
1081 ttagaagctg gaaagccatt cataaaagaa gcgtcaatgg ccaaatacta tgcatcagag
1141 attgcaggac aaacaacgag taaatgtatc gagtggatgg ggggagtagg ctacaccaaa
1201 gattaccctg tggagaaata cttccgagat gcaaagattg gtacgatata tgaaggagct
1261 tccaacatcc agttgaacac cattgcaaag catatcgatg cagaatactg acgtctatag
1321 gagtgggacc cctccctggt gtcactgctg taaaatttta aacggttgtg tcttgttggg
1381 agtaagtgcc ttgcgtggga ataaacttcc acagcattcg aatattttaa tgaagccctt
1441 agtcagggtc ctggtgttgg cctttttggt tttctctttt caggctgttt aacttaggca
1501 caggagatcc acttttaaac ttgggaaata agcacctgta tttttttcca aaactgtttt
1561 taaagctgta tacgcataca tatatatatt tttactctgt cttactctgt cacccaggct
1621 agagtgcagt ggcgcgatct cagctcactg cagccttgac ctcctgggtt ccagtgattc
1681 tcatgcctca tcctcccaag tagctggaac tacaggtgtg caccaccatg cctggttcat
1741 ttttgtgttt ttagtagaga tggggtttta ccatattgcc caggctggtc ttctggcttc
1801 tggatatcgc ccaccttggc ctcccaaagt gctgggatta cagggatgag ccaccgtgcc
1861 tggctgggta tttatattat cattctagtt tcagagtata cagaagtttc atcccatcat
1921 ttggaaaaat aaaggcatct gaagtacaat attacttata gaaatagttt atattcctat
1981 taaatcttaa tcttgtggca tcagggaaat atttgttaca tagtaggcaa tttttatcca
2041 gtactttata gattcaactc taagttgcaa gcgaagtcaa aactgatgaa aatttattta
2101 gaaaaatcta aaaattctgg ttttaaatat gagaatcagt ggaaaataag ggtataattt
2161 tgtaggtcat atgattgaag aaaatattat tttaacaatg taaagcaata tgatttgtta
2221 ctataattaa cctgtataaa agatacattt tatggtggtt tcagtaggtc attttaaaaa
2281 ccaatgtgca ttagttttca agtataaggt ttaagtaatt tggtttaata atcagaaaat
2341 attcaataca gtgttggata ttctgtcatg cactattttt cagttgaaaa aaaaaaaaaa
2401 a
//