LOCUS BC013728 1358 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens RAB7A, member RAS oncogene family, mRNA (cDNA clone
MGC:17256 IMAGE:3882701), complete cds.
ACCESSION BC013728
VERSION BC013728.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1358)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1358)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40807361.
FEATURES Location/Qualifiers
source 1..1358
/db_xref="H-InvDB:HIT000036337"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17256 IMAGE:3882701"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1358
/gene="RAB7A"
/gene_synonym="PRO2706"
/db_xref="GeneID:7879"
/db_xref="HGNC:HGNC:9788"
/db_xref="MIM:602298"
CDS 16..639
/gene="RAB7A"
/gene_synonym="PRO2706"
/codon_start=1
/product="RAB7A, member RAS oncogene family"
/protein_id="AAH13728.2"
/db_xref="GeneID:7879"
/db_xref="HGNC:HGNC:9788"
/db_xref="MIM:602298"
/translation="MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD
FLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW
RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAI
NVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC"
BASE COUNT 421 a 323 c 293 g 321 t
ORIGIN
1 ggccgcgttt gaaggatgac ctctaggaag aaagtgttgc tgaaggttat catcctggga
61 gattctggag tcgggaagac atcactcatg aaccagtatg tgaataagaa attcagcaat
121 cagtacaaag ccacaatagg agctgacttt ctgaccaagg aggtgatggt ggatgacagg
181 ctagtcacaa tgcagatatg ggacacagca ggacaggaac ggttccagtc tctcggtgtg
241 gccttctaca gaggtgcaga ctgctgcgtt ctggtatttg atgtgactgc ccccaacaca
301 ttcaaaaccc tagatagctg gagagatgag tttctcatcc aggccagtcc ccgagatcct
361 gaaaacttcc catttgttgt gttgggaaac aagattgacc tcgaaaacag acaagtggcc
421 acaaagcggg cacaggcctg gtgctacagc aaaaacaaca ttccctactt tgagaccagt
481 gccaaggagg ccatcaacgt ggagcaggcg ttccagacga ttgcacggaa tgcacttaag
541 caggaaacgg aggtggagct gtacaacgaa tttcctgaac ctatcaaact ggacaagaat
601 gaccgggcca aggcctcggc agaaagctgc agttgctgag ggggcagtga gagttgagca
661 cagagtcctt cacaaaccaa gaacacacgt aggccttcaa cacaattccc ctctcctctt
721 ccaaacaaaa catacattga tctctcacat ccagctgcca aaagaaaacc ccatcaaaca
781 cagttacacc ccacatatct ctcacacaca cacacacacg cacacacaca cacacagatc
841 tgacgtaatc aaactccagc ccttgcccgt gatggctcct tggggtctgc ctgcccaccc
901 acatgagccc gcgagtatgg cagcaggaca agccagcggt ggaagtcatt ctgatatgga
961 gttggcattg gaagcttatt ctttttgttc actggagaga gagagaactg tttacagtta
1021 atctgtgtct aattatctga ttttttttat tggtcttgtg gtctttttac cccccctttc
1081 ccctccctcc ttgaaggcta ccccttggga aggctggtgc cccatgcccc attacaggct
1141 cacacccagt ctgatcaggc tgagttttgt atgtatctat ctgttaatgc ttgttacttt
1201 taactaatca gatcttttta cagtatccat ttattgtaat gcttcttaga aaagaatctt
1261 atagtacatg ttaatatatg caaccaatta aaatgtataa attagtgtaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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