LOCUS BC013611 1494 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 31 (copper transporters), member
1, mRNA (cDNA clone MGC:9021 IMAGE:3881191), complete cds.
ACCESSION BC013611
VERSION BC013611.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1494)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1494)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254457.
FEATURES Location/Qualifiers
source 1..1494
/db_xref="H-InvDB:HIT000036305"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9021 IMAGE:3881191"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1494
/gene="SLC31A1"
/gene_synonym="CTR1"
/gene_synonym="hCTR1"
/db_xref="GeneID:1317"
/db_xref="HGNC:HGNC:11016"
/db_xref="MIM:603085"
CDS 116..688
/gene="SLC31A1"
/gene_synonym="CTR1"
/gene_synonym="hCTR1"
/codon_start=1
/product="solute carrier family 31 (copper transporters),
member 1"
/protein_id="AAH13611.1"
/db_xref="GeneID:1317"
/db_xref="HGNC:HGNC:11016"
/db_xref="MIM:603085"
/translation="MDHSHHMGMSYMDSNSTMQPSHHHPTTSASHSHGGGDSSMMMMP
MTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIR
YNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYL
CIAVAAGAGTGYFLFSWKKAVVVDITEHCH"
BASE COUNT 407 a 360 c 348 g 379 t
ORIGIN
1 ggccgttcga agagtcgtga gggggtgacg ggttaagatt cggagagaga ggtgctagtg
61 gctggacttg acctggaaag aatcttctgc tgactctcaa cttttcctgg aaaaaatgga
121 tcattcccac catatgggga tgagctatat ggactccaac agtaccatgc aaccttctca
181 ccatcaccca accacttcag cctcacactc ccatggtgga ggagacagca gcatgatgat
241 gatgcctatg accttctact ttggctttaa gaatgtggaa ctactgtttt ccggtttggt
301 gatcaataca gctggagaaa tggctggagc ttttgtggca gtgtttttac tagcaatgtt
361 ctatgaagga ctcaagatag cccgagagag cctgctgcgt aagtcacaag tcagcattcg
421 ctacaattcc atgcctgtcc caggaccaaa tggaaccatc cttatggaga cacacaaaac
481 tgttgggcaa cagatgctga gctttcctca cctcctgcaa acagtgctgc acatcatcca
541 ggtggtcata agctacttcc tcatgctcat cttcatgacc tacaacgggt acctctgcat
601 tgcagtagca gcaggggccg gtacaggata cttcctcttc agctggaaga aggcagtggt
661 agtggatatc acagagcatt gccattgaca tcaaactcta tggcgtggcc ttatcgattg
721 cagtgggaag ttgttgaaga cttgaagacg tgattcctgc tccaatcatc ccttcttgct
781 cctctttgtg cacgtacaca cacacacaca cacacacaca cacacacacc cctgctcaac
841 agaggtttag tttacagtct ctgaactaaa gtagtaacct cccaaattgt tttttctaat
901 aagctgagat tcccatttct cttaaggaga agccacccat gagatgtctt ttccttctcc
961 atcatcttag agccaagtta tatgttcttg tctaatccat gtagcttttt gttcaatgac
1021 ttgatcatct gcttcctttt tgaattttta acagatagta agtaaatttg gtggtttttt
1081 cccctgggtc agtgatggaa aggggttaac ttcagccagg attgatggca gctgagggaa
1141 attcttgccc aactaaaccc agaactcaaa cttaacatta gaaaataagg tccagggccg
1201 gacacagtgg cccatgcctg taatcccagc actttggggg gccaaggcag gctggatcac
1261 ctgaggacag gagttcgaga ccagtctggc caacatgggg aaaccccgtc tctactaaaa
1321 atacaaaaat tagccgggca tggtggtggg cgcctgtaat cccagctact cagaaggctg
1381 aggcaggaga atcacttgaa cctaggaggc ggaggttgca gtgagccaag atggcgccat
1441 tgcactccag cctgggtgac aagagtgaaa ctccatctca aaaaaaaaaa aaaa
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