LOCUS BC013573 2284 bp mRNA linear HUM 28-SEP-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 48, mRNA (cDNA
clone MGC:9174 IMAGE:3906038), complete cds.
ACCESSION BC013573
VERSION BC013573.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2284)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2284)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC013573.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: p Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885418.
FEATURES Location/Qualifiers
source 1..2284
/db_xref="H-InvDB:HIT000036282"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9174 IMAGE:3906038"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2284
/gene="ZBTB48"
/gene_synonym="pp9964"
/db_xref="GeneID:3104"
/db_xref="HGNC:HGNC:4930"
/db_xref="MIM:165270"
CDS 75..2141
/gene="ZBTB48"
/gene_synonym="pp9964"
/codon_start=1
/product="zinc finger and BTB domain containing 48"
/protein_id="AAH13573.1"
/db_xref="GeneID:3104"
/db_xref="HGNC:HGNC:4930"
/db_xref="MIM:165270"
/translation="MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVL
ACCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAAREL
RVPEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLV
PRDQEPRGSHSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLE
AEGAQLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPALSAGSL
AAEPAENRKGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENL
LEHEARNCMNRSEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKD
LQSHMIKLHGAPKPHACPTCAKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNG
LQMHIKAKHRNERPHVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASL
DKHNRTHTGERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCQICGKTFKAVEQLR
VHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKMV
VVALQPPAELEVGSAEVIVESLAQGGLASQLPGQRLCAEESFTGPGVLEPSLIITAAV
PEDCDT"
BASE COUNT 561 a 647 c 670 g 406 t
ORIGIN
1 cggacgcgtg ggctcttgca taccctcgct taggctggcc ggggtgtcac ttctgcctcc
61 ctgccctcca gaccatggac ggctccttcg tccagcacag tgtgagggtt ctgcaggagc
121 tcaacaagca gcgggagaag ggccagtact gcgacgccac tctggacgtg gggggcctgg
181 tgtttaaggc acactggagt gtccttgcct gctgcagtca ctttttccag agcctctacg
241 gggatggctc agggggcagt gtcgtcctcc ctgctggctt cgctgagatc tttggcctct
301 tgttggactt tttctacact ggtcacctcg ctctcacctc agggaaccgg gatcaggtgc
361 tcctggcagc cagggagttg cgagtgccag aggccgtaga gctgtgccag agcttcaagc
421 ccaaaacttc agtgggacag gcagcaggtg gccagagtgg gctggggccc cctgcctccc
481 agaatgtgaa cagccacgtc aaggagccgg caggcttgga agaagaggaa gtttcgagga
541 ctctgggtct agtccccagg gatcaggagc ccagaggcag tcatagtcct cagaggcccc
601 agctccattc cccagctcag agtgagggcc cctcctccct ctgtgggaaa ctgaagcagg
661 ccttgaagcc ttgtcccctt gaggacaaga aacccgagga ctgcaaagtg cccccaaggc
721 ccttagaggc tgaaggtgcc cagctgcagg gcggcagtaa tgagtgggaa gtggtggttc
781 aagtggagga tgatggggat ggcgattaca tgtctgagcc tgaggctgtg ctgaccagga
841 ggaagtcaaa tgtaatccga aagccctgtg cagctgagcc agccctgagc gcgggctccc
901 tagcagctga gcctgctgag aacagaaaag gtacagcggt gccggtcgaa tgccccacat
961 gtcataaaaa gttcctcagc aaatattatc taaaagtcca caacaggaaa catactgggg
1021 agaaaccctt tgagtgtccc aaatgtggga agtgttactt tcggaaggag aacctcctgg
1081 agcatgaagc ccggaattgc atgaaccgct cggaacaggt cttcacgtgc tctgtgtgcc
1141 aggagacatt ccgccgaagg atggagctgc gggtgcacat ggtgtctcac acaggggaga
1201 tgccctacaa gtgttcctcc tgctcccagc agttcatgca gaagaaggac ttgcagagcc
1261 acatgatcaa acttcatgga gcccccaagc cccatgcatg ccccacctgt gccaagtgct
1321 tcctgtctcg gacagagctg cagctgcatg aagctttcaa gcaccgtggt gagaagctgt
1381 ttgtgtgtga ggagtgtggg caccgggcct cgagccggaa tggcctgcag atgcacatca
1441 aggccaagca caggaatgag aggccacacg tatgtgagtt ctgcagccac gccttcaccc
1501 aaaaggccaa tctcaacatg cacctgcgca cacacacggg tgagaagccc ttccagtgcc
1561 acctctgtgg caagaccttc cgaacccaag ccagcctgga caagcacaac cgcacccaca
1621 ccggggaaag gcccttcagt tgcgagttct gtgaacagcg cttcactgag aaggggcccc
1681 tcctgaggca cgtggccagc cgccatcagg agggccggcc ccacttctgc cagatatgcg
1741 gcaagacctt caaagccgtg gagcaactgc gtgtgcacgt cagacggcac aagggggtga
1801 ggaagtttga gtgcaccgag tgtggctaca agtttacccg acaggcccac ctgcggaggc
1861 acatggagat ccacgaccgg gtagagaact acaacccgcg gcagcgcaag ctccgcaacc
1921 tgatcatcga ggacgagaag atggtggtgg tggcgctgca gccgcctgca gagctggagg
1981 tgggctcggc ggaggtcatt gtggagtccc tggcccaggg cggcctggcc tcccagctcc
2041 ccggccagag actgtgtgca gaggagagct tcaccggccc aggtgtcctg gagccctccc
2101 tcatcatcac agctgctgtc cccgaggact gtgacacata gcccactctg gccaccagag
2161 cccacttggc cccacccctc aataaaccgt gtggctttgg actctcgtaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2281 aaaa
//