LOCUS BC013367 2760 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens integrator complex subunit 1, mRNA (cDNA clone
IMAGE:3677373), partial cds.
ACCESSION BC013367
VERSION BC013367.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2760)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013367.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2760
/db_xref="H-InvDB:HIT000088100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3677373"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2760
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/db_xref="GeneID:26173"
CDS <1..2430
/gene="INT1"
/gene_synonym="DKFZp586J0619"
/gene_synonym="KIAA1440"
/codon_start=1
/product="INT1 protein"
/protein_id="AAH13367.2"
/db_xref="GeneID:26173"
/translation="QALGQELARVVQGSPEVPGITVRVLQALATLLSSPHGGALVMSM
HRSHFLACPLLRQLCQYQRCVPQDTGFSSLFLKVLLQMLQWLDSPGVEGGPLRAQLRM
LASQASAGRRLSDVRGGLLRLAEALAFRQDLEVVSSTVRAVIATLRSGEQCSVEPDLI
SKVLQGLIEVRSPHLEELLTAFFSATADAASPFPACKPVVVVSSLLLQEEEPLAGGKP
GADGGSLEAVRLGPSSGLLVDWLEMLDPEVVSSCPDLQLRLLFSRRKGKGQAQVPSFR
PYLLTLFTHQSSWPTLHQCIRVLLGKSREQRFDPSASLDFLWACIHVPRIWQGRDQRT
PQKRREELVLRVQGPELISLVELILAEAETRSQDGDTAACSLIQARLPLLLSCCCGDD
ESVRKVTEHLSGCIQQWGDSVLGRRCRDLLLQLYLQRPELRVPVPEVLLHSEGAASSS
VCKLDGLIHRFITLLADTSDSRALENRGADASMACRKLAVAHPLLLLRHLPMIAALLH
GRTHLNFQEFRQQNHLSCFLHVLGLLELLQPHVFRSEHQGALWDCLLSFIRLLLNYRK
SSRHLAAFINKFVQFIHKYITYNAPAAISFLQKHADPLHDLSFDNSDLVMLKSLLAGL
SLPSRDDRTDRGLDEEGEEESSAGSLPLVSVSLFTPLTAAEMAPYMKRLSRGQTVEDL
LEVLSDIDEMSRRRPEILSFFSTNLQRLMSSAEECCRNLAFSLALRSMQNSPSIAAAF
LPTFMYCLGSQDFEVVQTALRNLPEYALLCQEHAAVLLHRAFLVGMYGQMDPSAQISE
ALRILHMEAVM"
BASE COUNT 460 a 938 c 886 g 476 t
ORIGIN
1 caggccctgg gccaggagct ggcccgcgtc gtccagggca gccccgaggt gccgggcatc
61 acggtgcgtg tcctgcaggc cctcgccacc ctgctcagct ccccacacgg cggtgccctg
121 gtgatgtcca tgcaccgtag ccacttcctg gcctgcccgc tgctgcgcca gctctgccag
181 taccagcgct gtgtgccaca ggacaccggc ttctcctcgc tcttcctgaa ggtgctcctg
241 cagatgctgc agtggctgga cagccctggc gtggagggcg ggcccctgcg ggcacagctc
301 aggatgcttg ccagccaggc ctcagccggg cgcaggctca gtgatgtgcg aggggggctc
361 ctgcgcctgg ccgaggccct ggccttccgt caggacctgg aggtggtcag ctccaccgtc
421 cgtgccgtca tcgccaccct gaggtctggg gagcagtgca gcgtggagcc ggacctgatc
481 agcaaagtcc tccaggggct gatcgaggtg aggtcccccc acctggagga gctgctgact
541 gcattcttct ctgccactgc ggatgctgcc tccccgtttc cagcctgtaa gcccgttgtg
601 gtggtgagct ccctgctgct gcaggaggag gagcccctgg ctggggggaa gccgggtgcg
661 gacggtggca gcctggaggc cgtgcggctg gggccctcgt caggcctcct agtggactgg
721 ctggaaatgc tggaccccga ggtggtcagc agctgccccg acctgcagct caggctgctc
781 ttctcccgga ggaagggcaa aggtcaggcc caggtgccct cgttccgtcc ctacctcctg
841 accctcttca cgcatcagtc cagctggccc acactgcacc agtgcatccg agtcctgctg
901 ggcaagagcc gggaacagag gttcgacccc tctgcctctc tggacttcct ctgggcctgc
961 atccatgttc ctcgcatctg gcaggggcgg gaccagcgca ccccgcagaa gcggcgggag
1021 gagctggtgc tgcgggtcca gggcccggag ctcatcagcc tggtggagct gatcctggcc
1081 gaggcggaga cgcggagcca ggacggggac acagccgcct gcagcctcat ccaggcccgg
1141 ctgcccctgc tgctcagctg ctgctgtggg gacgatgaga gtgtcaggaa ggtgacggag
1201 cacctgtcag gctgcatcca gcagtgggga gacagcgtgc tgggcaggcg ctgccgagac
1261 cttctcctgc agctctacct acagcggccg gagctgcggg tgcccgtgcc tgaggtccta
1321 ctgcacagcg aaggggctgc cagcagcagc gtctgcaagc tggacggact catccaccgc
1381 ttcatcacgc tccttgcgga caccagcgac tcccgggcgt tggagaaccg aggggcggat
1441 gccagcatgg cctgccggaa gctggcggtg gcgcacccgc tgctgctgct caggcacctg
1501 cccatgatcg cggcgctcct gcacggccgc acccacctca acttccagga gttccggcag
1561 cagaaccacc tgagctgctt cctgcacgtg ctgggcctgc tggagctgct gcagccgcac
1621 gtgttccgca gcgagcacca gggggcgctg tgggactgcc ttctgtcctt catccgcctg
1681 ctgctgaatt acaggaagtc ctcccgccat ctggctgcct tcatcaacaa gtttgtgcag
1741 ttcatccata agtacattac ctacaatgcc ccagcagcca tctccttcct gcagaagcac
1801 gccgacccgc tccacgacct gtccttcgac aacagtgacc tggtgatgct gaaatccctc
1861 cttgcagggc tcagcctgcc cagcagggac gacaggaccg accgaggcct ggacgaagag
1921 ggcgaggagg agagctcagc cggctccttg cccctggtca gcgtctccct gttcacccct
1981 ctgaccgcgg ccgagatggc cccctacatg aaacggcttt cccggggcca aacggtggag
2041 gatctgctgg aggttctgag tgacatagac gagatgtccc ggcggagacc cgagatcctg
2101 agcttcttct cgaccaacct gcagcggctg atgagctcgg ccgaggagtg ttgccgcaac
2161 ctcgccttca gcctggccct gcgctccatg cagaacagcc ccagcattgc agccgctttc
2221 ctgcccacgt tcatgtactg cctgggcagc caggactttg aggtggtgca gacggccctc
2281 cggaacctgc ctgagtacgc tctcctgtgc caagagcacg cggctgtgct gctccaccgg
2341 gccttcctgg tgggcatgta cggccagatg gaccccagcg cgcagatctc cgaggccctg
2401 aggatcctgc atatggaggc cgtgatgtga gcctgtggca gccgaccccc ctccaagccc
2461 cggcccgtcc cgtccccggg gatcctcgag gcaaagccca ggaagcgtgg gcgttgctgg
2521 tctgtccgag gaggtgaggg cgccgagccc tgaggccagg caggcccagg agcaatactc
2581 cgagccctgg ggtggctccg ggccggccgc tggcatcagg ggccgtccag caagccctca
2641 ttcaccttct gggccacagc cctgccgcgg agcggcggat ccccccgggg catggcctgg
2701 gctggttttg aatgaaacga cctgaactgt caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//