LOCUS BC013358 2975 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens integrator complex subunit 6, mRNA (cDNA clone
IMAGE:3630405), partial cds.
ACCESSION BC013358
VERSION BC013358.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2975)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2975)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013358.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11024693.
FEATURES Location/Qualifiers
source 1..2975
/db_xref="H-InvDB:HIT000088097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3630405"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>2975
/gene="INTS6"
/gene_synonym="DBI-1"
/gene_synonym="DDX26A"
/gene_synonym="DICE1"
/gene_synonym="DKFZP434B105"
/gene_synonym="HDB"
/gene_synonym="INT6"
/gene_synonym="Notchl2"
/db_xref="GeneID:26512"
/db_xref="HGNC:HGNC:14879"
/db_xref="MIM:604331"
CDS 493..>2975
/gene="INTS6"
/gene_synonym="DBI-1"
/gene_synonym="DDX26A"
/gene_synonym="DICE1"
/gene_synonym="DKFZP434B105"
/gene_synonym="HDB"
/gene_synonym="INT6"
/gene_synonym="Notchl2"
/codon_start=1
/product="INTS6 protein"
/protein_id="AAH13358.1"
/db_xref="GeneID:26512"
/db_xref="HGNC:HGNC:14879"
/db_xref="MIM:604331"
/translation="MPILLFLIDTSASMNQRSHLGTTYLDTAKGAVETFMKLRARDPA
SRGDRYMLVTFEEPPYAIKAGWKENHATFMNELKNLQAEGLTTLGQSLRTAFDLLNLN
RLVTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDELHLPLNSPLPGSELTKE
PFRWDQRLFALVLRLPGTMSVESEQLTGVPLDDSAITPMCEVTGGRSYSVCSPRMLNQ
CLESLVQKVQSGVVINFEKAGPDPSPVEDGQPDISRPFGSQPWHSCHKLIYVRPNPKT
GVPIGHWPVPESFWPDQNSPTLPPRTSHPVVKFSCTDCEPMVIDKLPFDKYELEPSPL
TQFILERKSPQTCWQVYVSNSAKYSELGHPFGYLKASTALNCVNLFVMPYNYPVLLPL
LDDLFKVHKAKPTLKWRQSFESYLKTMPPYYLGPLKKAVRMMGAPNLIADSMEYGLSY
SVISYLKKLSQQAKIESDRVIGSVGKKVVQETGIKVRSRSHGLSMAYRKDFQQLLQGI
SEDVPHRLLDLNMKEYTGFQVALLNKDLKPQTFRNAYDIPRRNLLDHLTRMRSNLLKS
TRRFLKGQDEDQVHSVPIAQMGNYQEYLKQVPSPLRELDPDQPRRLHTFGNPFKLDKK
GMMIDEADEFVAGPQNKHKRPGEPNMQGIPKRRRCMSPLLRGRQQNPVVNNHIGGKGP
PAPTTQAQPDLIKPLPLHKISETTNDSIIHDVVENHVADQLSSDITPNAMDTEFSASS
PASLLERPTNHMEALGHDHLGTNDLTVGGFLENHEEPRDKEQCAEENIPASSLNKGKK
LMHCRSHEEVNTELKAQKKKKKKKKKKKK"
BASE COUNT 887 a 706 c 690 g 692 t
ORIGIN
1 ctgagaaagt ggtgacaccg ccggggtgcg gagggagtcc ctgaaacttc tcccaacagc
61 cccagggcca atcttccctc agcccactcc cctcttcgcc agctcccagg tccccactcc
121 tgtaccgggg gtggggtggg gagccaggcc cgtctcccgc tgggacacac acaggggccg
181 ggagcgggga cgggaccccc gaggcggggg ggacgaaccg acagacagac ggctgggcgc
241 ccgccccagc gggcaggcag gcaggaggag gcggaggcgg gggtacgacg gggagcactg
301 ggtctgggga gtttcctctc aactatcggg ggagaaactc cccgcagccg gaggaaagac
361 ccagacagtg ttttcctccc gggggccgtg ctcccccgcc ccgcgtagcg gcggtcgccg
421 ccaccggcgc ctccacctct accatctcct ctttctccac cacctcgggc cccggtgtcc
481 ccggccagca ctatgcccat cttactgttc ctgatagaca cgtctgcctc tatgaaccag
541 cgcagccatc tgggcaccac ctacctggac acggccaaag gcgcggtaga gaccttcatg
601 aagctccgtg cccgggaccc tgccagcaga ggagacaggt atatgctggt cactttcgaa
661 gagccgccct atgctatcaa ggctggatgg aaagaaaacc atgcaacgtt tatgaatgaa
721 ttgaaaaacc ttcaggctga aggacttacg actcttggcc aatccctaag gacagctttt
781 gatttattaa atttaaatag attagtaact ggcatagaca actatgggca gggaagaaac
841 ccttttttct tggagccagc aataattatc acaattactg atgggagcaa gttgactacc
901 accagtggag tccaggatga gcttcattta cctcttaatt ctcctttgcc tggaagtgaa
961 ttgaccaagg aaccttttcg ttgggatcag agactctttg cattagtgtt gcggttgcct
1021 ggcaccatgt cagtagaatc agaacagttg acaggtgtgc ctttagatga ctctgcaatc
1081 acaccaatgt gtgaagtgac aggcggccgt tcatattctg tgtgttctcc aagaatgctt
1141 aatcagtgtc tggagtcctt ggtgcagaaa gtacaaagtg gggtggtaat aaactttgaa
1201 aaagcaggac cagatccttc ccctgtagaa gatgggcagc cagatatatc aaggcctttt
1261 ggatctcagc cttggcatag ctgtcacaaa ctcatatatg tcagaccaaa tcctaaaact
1321 ggggttccta taggtcattg gcctgttcca gagtcttttt ggccagatca aaattcgcca
1381 acactaccac ctcgtacatc tcatcctgta gtgaagtttt cctgtacaga ctgtgaacca
1441 atggttattg ataaacttcc ttttgacaaa tatgagttgg aaccttcacc actgactcaa
1501 tttatcctgg aaaggaaatc tcctcaaaca tgttggcagg tgtacgtgag caatagtgca
1561 aaatacagtg aacttggtca tccttttggt tacttgaaag ccagtacagc actgaactgt
1621 gtcaacttat ttgtgatgcc ttacaattat ccagtccttc ttcccctctt agatgacttg
1681 tttaaagtgc ataaagcaaa accaacattg aagtggagac agtcatttga aagttatttg
1741 aagacaatgc ctccctacta tcttgggccc ttgaagaaag ctgttaggat gatgggagca
1801 cctaacctaa tagcagacag tatggaatat ggacttagtt acagtgtcat ttcatacctc
1861 aaaaaactga gtcaacaggc caaaatagaa tctgatcgag tcattggatc tgtaggcaaa
1921 aaagtagtac aggagactgg aataaaagtc cggagccgat cacatggttt atcaatggca
1981 tataggaaag attttcaaca actcctccag ggaatttcag aggatgtccc tcacagactg
2041 ctagacctta atatgaagga atacactggg ttccaagttg ctttgctgaa taaggatttg
2101 aagccacaga catttagaaa tgcttatgac ataccaagac gaaatctttt ggatcactta
2161 acaagaatga gatctaatct tttgaagagc actcgcagat ttctgaaagg acaggacgaa
2221 gatcaagtgc acagtgttcc tatagcacaa atggggaact accaggaata cctcaagcaa
2281 gtaccttctc cactaagaga acttgatcct gatcagccac gaaggttgca tacatttggc
2341 aaccccttta agctggataa gaagggtatg atgatagatg aagcagatga atttgtggct
2401 ggacctcaaa ataaacataa acgacccgga gaaccaaata tgcaagggat ccctaaaaga
2461 cgtcggtgta tgtctccact actaagaggc agacagcaga atcctgttgt aaacaatcat
2521 attgggggaa aaggaccacc tgcacctaca actcaagcac agccagatct tattaaacct
2581 cttcctcttc ataaaatttc agaaaccact aatgattcga taatacatga tgtggttgaa
2641 aatcatgttg cagaccaact ttcatcagac attacaccaa atgctatgga tacggaattt
2701 tcagcatctt ctccagccag tttactggaa cggccaacca atcatatgga ggctcttggt
2761 catgaccatt taggaaccaa tgacctcact gttggtggat ttttagaaaa tcatgaggag
2821 ccaagagata aagaacaatg tgctgaagag aacataccag catcttcact caacaaagga
2881 aagaaattga tgcattgcag aagccatgaa gaggtcaata ctgaactaaa agcacaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//