LOCUS BC013331 1337 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens H2A histone family, member Y, mRNA (cDNA clone MGC:13692 IMAGE:4077577), complete cds. ACCESSION BC013331 VERSION BC013331.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1337) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1337) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: d Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20336744. FEATURES Location/Qualifiers source 1..1337 /db_xref="H-InvDB:HIT000036219" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13692 IMAGE:4077577" /tissue_type="Bone marrow, acute myelogenous leukemia" /clone_lib="NIH_MGC_55" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1337 /gene="H2AFY" /gene_synonym="H2A.y" /gene_synonym="H2A/y" /gene_synonym="H2AF12M" /gene_synonym="H2AFJ" /gene_synonym="MACROH2A1.1" /gene_synonym="MACROH2A1.2" /gene_synonym="mH2A1" /db_xref="GeneID:9555" CDS 137..1255 /gene="H2AFY" /gene_synonym="H2A.y" /gene_synonym="H2A/y" /gene_synonym="H2AF12M" /gene_synonym="H2AFJ" /gene_synonym="MACROH2A1.1" /gene_synonym="MACROH2A1.2" /gene_synonym="mH2A1" /codon_start=1 /product="H2AFY protein" /protein_id="AAH13331.1" /db_xref="GeneID:9555" /translation="MSSRGGKKKSTKTSRSAKAGVIFPVGRMLRYIKKGHPKYRIGVG APVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIAS GGVLPNIHPELLAKKRGSKGKLEAIITPPPAKKAKSPSQKKPVSKKAGGKKGARKSKK KQGEVSKAASADSTTEGTPADGFTVLSTKSLFLGQKLNLIHSEISNLAGFEVEAIINP TNADIDLKDDLGNTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSAGHGLPAKFVIHC NSPVWGADKCEELLEKTVKNCLALADDKKLKSIAFPSIGSGRNGFPKQTAAQLILKAI SSYFVSTMSSSIKTVYFVLFDSESIGIYVQEMAKLDAN" misc_feature 194..496 /gene="H2AFY" /gene_synonym="H2A.y" /gene_synonym="H2A/y" /gene_synonym="H2AF12M" /gene_synonym="H2AFJ" /gene_synonym="MACROH2A1.1" /gene_synonym="MACROH2A1.2" /gene_synonym="mH2A1" /note="H2A; Region: Histone 2A" /db_xref="CDD:smart00414" misc_feature 716..1234 /gene="H2AFY" /gene_synonym="H2A.y" /gene_synonym="H2A/y" /gene_synonym="H2AF12M" /gene_synonym="H2AFJ" /gene_synonym="MACROH2A1.1" /gene_synonym="MACROH2A1.2" /gene_synonym="mH2A1" /note="hismacro; Region: Domain found in Macro histone 2 (predicted phosphoesterase)" /db_xref="CDD:LOAD_hismacro" BASE COUNT 390 a 336 c 360 g 251 t ORIGIN 1 gggggtctac attagtaatt cccaacttgg gtccgaaagt gaacttttgc tgaagcgaag 61 tagctaaccg cttccatgtg caaggcaggt tccagacttc gggtgtgctc actgatccgc 121 ctccagggcc accgccatgt cgagccgcgg tgggaagaag aagtccacca agacgtccag 181 gtctgccaaa gcaggagtca tctttcccgt ggggcggatg ctgcggtaca tcaagaaagg 241 ccaccccaag tacaggattg gagtgggggc acccgtgtac atggccgccg tcctggaata 301 cctgacagcg gagattctgg agctggctgg caatgcagcg agagacaaca agaagggacg 361 ggtcacaccc cggcacatcc tgctggctgt ggccaatgat gaagagctga atcagctgct 421 aaaaggagtc accatagcca gtgggggtgt gttacccaac atccaccccg agttgctagc 481 gaagaagcgg ggatccaaag gaaagttgga agccatcatc acaccacccc cagccaaaaa 541 ggccaagtct ccatcccaga agaagcctgt atctaaaaaa gcaggaggca agaaaggggc 601 ccggaaatcc aagaagaagc agggtgaagt cagtaaggca gccagcgccg acagcacaac 661 cgagggcaca cctgccgacg gcttcacagt cctctccacc aagagcctct tccttggcca 721 gaagctgaac cttattcaca gtgaaatcag taatttagcc ggctttgagg tggaggccat 781 aatcaatcct accaatgctg acattgacct taaagatgac ctaggaaaca cgctggagaa 841 gaaaggtggc aaggagtttg tggaagctgt cctggaactc cggaaaaaga acgggccctt 901 ggaagtagct ggagctgctg tcagcgcagg ccatggcctg cctgccaagt ttgtgatcca 961 ctgtaatagt ccagtttggg gtgcagacaa gtgtgaagaa cttctggaaa agacagtgaa 1021 aaactgcttg gccctggctg atgataagaa gctgaaatcc attgcatttc catccatcgg 1081 cagcggcagg aacggttttc caaagcagac agcagctcag ctgattctga aggccatctc 1141 cagttacttc gtgtctacaa tgtcctcttc catcaaaacg gtgtacttcg tgctttttga 1201 cagcgagagt ataggcatct atgtgcagga aatggccaag ctggacgcca actaggctga 1261 gcaatgacag aaccagctgc accatgtacc ccaccttcag tttaaaagaa aaaaaaaaaa 1321 aaaaaaaaaa aaaaaaa //