LOCUS BC013319 1478 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens FYVE, RhoGEF and PH domain containing 6, mRNA (cDNA
clone IMAGE:4286103), partial cds.
ACCESSION BC013319
VERSION BC013319.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1478)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1478)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: m Column: 18.
FEATURES Location/Qualifiers
source 1..1478
/db_xref="H-InvDB:HIT000036211"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4286103"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1478
/gene="FGD6"
/gene_synonym="ZFYVE24"
/db_xref="GeneID:55785"
/db_xref="HGNC:HGNC:21740"
CDS <1..1232
/gene="FGD6"
/gene_synonym="ZFYVE24"
/codon_start=3
/product="FGD6 protein"
/protein_id="AAH13319.2"
/db_xref="GeneID:55785"
/db_xref="HGNC:HGNC:21740"
/translation="DSTYIKEFDKNIALLDEQCKKNPGFATVVREFEMSPRCANLALK
HYLLKPVQRIPQYRLLLTDYLKNLIEDAGDYRDTQDALAVVVEVANHANDTMKQGDNF
QKLMQIQYSLNGHHEIVQPGRVFLKEGILMKLSRKVMQPRMFFLFNDALLYTTPVQSG
MYKLNNMLSLAGMKVRKPTQEAYQNELKIESVERSFILSASSATERDEWLEAISRAIE
EYAKKRITFCPSRSLDEADSENKEEVSPLGSKAPIWIPDTRATMCMICTSEFTLTWRR
HHCRACGKIVCQACSSNKYGLDYLKNQPARVCEHCFQELQKLDHQHSPRIGSPGNHKS
PSSALSSVLHSIPSGRKQKKIPAALKEVSANTEDSSMSGYLYRSKGNKKPWKHFWFVI
KNKVLYTYAASEVRSEI"
BASE COUNT 481 a 284 c 312 g 401 t
ORIGIN
1 gggattccac atacatcaaa gaatttgata agaatatagc cttgctggat gaacagtgca
61 agaaaaatcc aggttttgct actgttgtta gagaatttga gatgagccct cgctgtgcta
121 atctggccct caagcactac ctgctcaagc cggttcagag gatcccccag tacaggctgt
181 tgctgacaga ttatttgaag aatctcatag aagatgctgg agattacaga gacactcaag
241 atgcccttgc tgttgttgta gaggtagcca accacgccaa tgacaccatg aagcaaggag
301 acaactttca gaaacttatg caaattcagt acagcttaaa tggacaccat gaaattgtgc
361 agcctggtcg ggtttttctc aaagaaggaa ttctgatgaa gctgtctcgg aaagtgatgc
421 aacctcgaat gtttttcctg tttaatgatg ccctgctgta tacaacacca gtgcagtctg
481 ggatgtataa actgaacaac atgctctcac tggctggaat gaaggtcaga aaacctaccc
541 aagaagccta tcagaatgaa ttaaagattg aaagtgtaga acgttccttc attctctcag
601 ccagttctgc cacagaaagg gatgaatggc tagaagcgat ttccagggca atagaagagt
661 atgccaagaa aagaatcacc ttctgtccta gtaggagtct tgatgaggca gactcagaaa
721 ataaagaaga agttagtcct cttggatcga aggctcccat ctggattcct gataccagag
781 ccacaatgtg tatgatctgc acaagcgaat tcactctcac ctggagacga caccactgcc
841 gggcctgtgg aaagattgta tgccaagctt gttcgtctaa taagtatggc ttagattacc
901 tgaaaaatca accagcaaga gtatgtgaac attgtttcca agaactgcag aaattagatc
961 accagcactc ccctaggatt ggatctcctg gaaatcacaa atctccttca agtgccttat
1021 catcagtctt acatagcatt ccatcaggga ggaaacagaa aaaaatccca gctgctctca
1081 aagaagtatc agcaaacaca gaggattctt ctatgagtgg ctacttgtac agatcaaagg
1141 gcaataaaaa accctggaaa cacttttggt ttgtcataaa aaataaagta ctatatacat
1201 atgctgcaag tgaggtaaga tctgaaatct aaagatgagt aatttggggt tttgtaatgc
1261 caactgcaag taattacaat attttaaaaa tccatttatt ttacataaga ttttttgctt
1321 tgcttttgga tgggggaggt gttgttgctg ttatttttaa tgtgaacagt gttcttgctt
1381 tgtacctgga gagctctttc tcaaatgtgt taggaatttt ccatattatt aaaatgcaat
1441 ttttgtgtgt gcaaaaaaaa aaaaaaaaaa aaaaaaaa
//