LOCUS BC013311 1413 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mitochondrial ribosomal protein L38, mRNA (cDNA clone
MGC:4810 IMAGE:3546083), complete cds.
ACCESSION BC013311
VERSION BC013311.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1413)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1413)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013311.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: n Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 26667164.
FEATURES Location/Qualifiers
source 1..1413
/db_xref="H-InvDB:HIT000036205"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4810 IMAGE:3546083"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1413
/gene="MRPL38"
/gene_synonym="HSPC262"
/gene_synonym="MGC4810"
/gene_synonym="MRP-L3"
/gene_synonym="RPML3"
/db_xref="GeneID:64978"
/db_xref="HGNC:HGNC:14033"
CDS 127..1167
/gene="MRPL38"
/gene_synonym="HSPC262"
/gene_synonym="MGC4810"
/gene_synonym="MRP-L3"
/gene_synonym="RPML3"
/codon_start=1
/product="mitochondrial ribosomal protein L38"
/protein_id="AAH13311.1"
/db_xref="GeneID:64978"
/db_xref="HGNC:HGNC:14033"
/translation="MPNSDIDLSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYF
GEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVR
AEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVT
PTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC
PYLPPFPARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQET
MTPAGLSFFQCRWDDSVTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDR
YRDSHEPTYGIY"
BASE COUNT 306 a 439 c 417 g 251 t
ORIGIN
1 gcagtgtcgc aggccggagg gaagatggcg gcgccctggt ggcgagccgc gctgtgcgag
61 tgtcggagat ggcggggctt cagcacctcg gccgtcctgg gccgccggac acccccgctg
121 gggccgatgc ccaacagtga catcgacttg agcaacctgg agcggctgga gaagtaccgg
181 agcttcgacc gctaccggcg ccgagcagag caggaggcgc aggccccgca ctggtggcgg
241 acctaccgag agtatttcgg ggagaagaca gatcccaaag agaagattga tattgggctg
301 cctccaccca aagtctcccg gacccaacag ctactggaac ggaaacaggc catccaggag
361 cttcgggcca atgtggaaga ggagcgggct gcccgcctcc gcacagccag tgtcccgctg
421 gatgccgtgc gggccgagtg ggagaggacc tgtggcccct accacaagca gcgtctggct
481 gagtattacg gcctctaccg agacctgttc cacggtgcca cctttgtgcc ccgagtcccc
541 ctgcacgtgg cctacgctgt gggtgaggat gacctgatgc ctgtgtactg tggcaatgag
601 gtgactccaa ccgaggctgc ccaagcgcca gaggtgacct atgaggcaga agagggctcc
661 ttgtggacgt tgctactcac tagcttggat gggcacctgc tggagccaga tgctgagtac
721 ctccactggc tgctaaccaa catcccgggt aaccgggtgg ctgaaggaca ggtgacgtgt
781 ccctacctcc cccccttccc tgcccgaggc tccggcatcc accgtcttgc cttcctgctc
841 ttcaagcagg accagccgat tgacttctct gaggacgcac gcccctcacc ctgctatcag
901 ctggcccagc ggaccttccg cacttttgat ttctacaaga aacaccaaga aaccatgact
961 ccagccggct tgtccttctt ccagtgccgc tgggatgact ccgtcaccta catcttccac
1021 cagcttctgg acatgcggga gccggtgttt gagttcgtgc ggccgccccc ttaccacccc
1081 aagcagaagc gcttccccca ccggcagccc ctgcgctacc tggaccggta cagggacagt
1141 catgagccca cctatggcat ctactaagga gccagagtgt gcgcatttca gagcatggga
1201 ttgatcggca gcaagagtaa agacacagct ccagaggccc acactgtggg gtctgggccc
1261 tgccttaggc agcccccctc tttggccccc tcccgtcagg cccagggctt ggagtgaaag
1321 tgactctcag gtggtggggt ggggaatgtg aataaacatg atttcttgcc gggcaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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