LOCUS BC013306 962 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transcription elongation factor B (SIII), polypeptide
2 (18kDa, elongin B), mRNA (cDNA clone MGC:4486 IMAGE:2963043),
complete cds.
ACCESSION BC013306
VERSION BC013306.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 962)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 962)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC013306.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: b Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46276891.
FEATURES Location/Qualifiers
source 1..962
/db_xref="H-InvDB:HIT000036202"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4486 IMAGE:2963043"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..962
/gene="TCEB2"
/gene_synonym="SIII"
/db_xref="GeneID:6923"
/db_xref="HGNC:HGNC:11619"
/db_xref="MIM:600787"
CDS 12..368
/gene="TCEB2"
/gene_synonym="SIII"
/codon_start=1
/product="transcription elongation factor B (SIII),
polypeptide 2 (18kDa, elongin B)"
/protein_id="AAH13306.1"
/db_xref="GeneID:6923"
/db_xref="HGNC:HGNC:11619"
/db_xref="MIM:600787"
/translation="MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRL
YKDDQLLDDGKTLGECGFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDV
MKPQDSGSSANEQAVQ"
BASE COUNT 234 a 299 c 258 g 171 t
ORIGIN
1 cagcagccgc gatggacgtg ttcctcatga tccggcgcca caagaccacc atcttcacgg
61 acgccaagga gtccagcacg gtgttcgaac tgaagcgcat cgtcgagggc atcctcaagc
121 ggcctcctga cgagcagcgg ctgtacaagg atgaccaact cttggatgat ggcaagacac
181 tgggcgagtg tggcttcacc agtcaaacag cacggccaca ggccccagcc acagtggggc
241 tggccttccg ggcagatgac acctttgagg ccctgtgcat cgagccgttt tccagcccgc
301 cagagctgcc cgatgtgatg aagccccagg actcgggaag cagtgccaat gaacaagccg
361 tgcagtgaga cccccaagag gcccatttcc cccaataaaa gagatttggg agtctgcctg
421 gttgctgcct ctttttcccg cccctccctg ggatgggtcc cactccctgt gggctccttt
481 tggggcttgt gcttggcagt tcctgtgctg tcctgtctcc cagatcctga gaccctggct
541 gagaacttgg cccagcctgc tgcttaaagg caccatgggg acctgggttg ccctcagacc
601 caagccattg ttagcagcta gccagccaca ccaaccacgc cagggggagg aaagggaagg
661 actgggagag acacaaagac cagagccagc ctcagggaca agagattcca gttttaggcc
721 tttctccttc taagtgcccc ccacccccat agcctgcatg tccactccca gacgatggcc
781 aagagcagaa acacaagctg gagccagtgt cctggtttga cagcatgttc aacgagggaa
841 ccccaagacg gacccacaca ggtccaccca cgctgggggc tgtaatcacg gagggaagtg
901 gctgccccct taacacacct ttaataaaca gtctacagac ccaaaaaaaa aaaaaaaaaa
961 aa
//