LOCUS BC013293 1208 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synuclein, alpha (non A4 component of amyloid precursor), mRNA (cDNA clone MGC:3484 IMAGE:3604532), complete cds. ACCESSION BC013293 VERSION BC013293.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1208) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1208) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC013293.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6806897. FEATURES Location/Qualifiers source 1..1208 /db_xref="H-InvDB:HIT000036190" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3484 IMAGE:3604532" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1208 /gene="SNCA" /gene_synonym="NACP" /gene_synonym="PARK4" /gene_synonym="PD1" /db_xref="GeneID:6622" /db_xref="HGNC:HGNC:11138" /db_xref="MIM:163890" CDS 424..846 /gene="SNCA" /gene_synonym="NACP" /gene_synonym="PARK4" /gene_synonym="PD1" /codon_start=1 /product="synuclein, alpha (non A4 component of amyloid precursor)" /protein_id="AAH13293.1" /db_xref="GeneID:6622" /db_xref="HGNC:HGNC:11138" /db_xref="MIM:163890" /translation="MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKT KEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGK NEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA" BASE COUNT 327 a 272 c 328 g 281 t ORIGIN 1 agagaggggg cgagcgaccg agcgccgcga cgcggaagtg aggtgcgtgc gggctgcagc 61 gcagaccccg gcccggcccc tccgagagcg tcctgggcgc tccctcacgc cttgccttca 121 agccttctgc ctttccaccc tcgtgagcgg agaactggga gtggccattc gacgacaggt 181 tagcgggttt gcctcccact cccccagcct cgcgtcgccg gctcacagcg gcctcctctg 241 gggacagtcc cccccgggtg ccgcctccgc ccttcctgtg cgctcctttt ccttcttctt 301 tcctattaaa tattatttgg gaattgttta aatttttttt ttaaaaaaaa gagagaggcg 361 gggaggagtc ggagttgtgg agaagcagag ggactcagtg tggtgtaaag gaattcatta 421 gccatggatg tattcatgaa aggactttca aaggccaagg agggagttgt ggctgctgct 481 gagaaaacca aacagggtgt ggcagaagca gcaggaaaga caaaagaggg tgttctctat 541 gtaggctcca aaaccaagga gggagtggtg catggtgtgg caacagtggc tgagaagacc 601 aaagagcaag tgacaaatgt tggaggagca gtggtgacgg gtgtgacagc agtagcccag 661 aagacagtgg agggagcagg gagcattgca gcagccactg gctttgtcaa aaaggaccag 721 ttgggcaaga atgaagaagg agccccacag gaaggaattc tggaagatat gcctgtggat 781 cctgacaatg aggcttatga aatgccttct gaggaagggt atcaagacta cgaacctgaa 841 gcctaagaaa tatctttgct cccagtttct tgagatctgc tgacagatgt tccatcctgt 901 acaagtgctc agttccaatg tgcccagtca tgacatttct caaagttttt acagtgtatc 961 tcgaagtctt ccatcagcag tgattgaagt atctgtacct gcccccactc agcatttcgg 1021 tgcttccctt tcactgaagt gaatacatgg tagcagggtc tttgtgtgct gtggattttg 1081 tggcttcaat ctacgatgtt aaaacaaatt aaaaacacct aagtgactac cacttatttc 1141 taaatcctca ctattttttg ttgctgttga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 aaaaaaaa //