LOCUS BC013283 2306 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nicalin homolog (zebrafish), mRNA (cDNA clone
MGC:16507 IMAGE:3959506), complete cds.
ACCESSION BC013283
VERSION BC013283.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC013283.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52353964.
FEATURES Location/Qualifiers
source 1..2306
/db_xref="H-InvDB:HIT000036185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16507 IMAGE:3959506"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2306
/gene="NCLN"
/db_xref="GeneID:56926"
/db_xref="HGNC:HGNC:26923"
/db_xref="MIM:609156"
CDS 432..2123
/gene="NCLN"
/codon_start=1
/product="nicalin homolog (zebrafish)"
/protein_id="AAH13283.2"
/db_xref="GeneID:56926"
/db_xref="HGNC:HGNC:26923"
/db_xref="MIM:609156"
/translation="MLEEAGEVLENMLKASCLPLGFIVFLPAVLLLVAPPLPAADAAH
EFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAAEVLSRRCVLMRLLDFSYEQYQKALR
QSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAMETAVPVYFAVEDEALLSIYKQTQ
AASASQGSASAAEVLLRTATANGFQMVTSGVQSKAVSDWLIASVEGRLTGLGGEDLPT
IVIVAHYDAFGVAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASG
GGKFNYQGTKRWLEDNLDHTDSSLLQDNVAFVLCLDTVGRGSSLHLHVSKPPREGTLQ
HAFLRELETVAAHQFPEVRFSMVHKRINLAEDVLAWEHERFAIRRLPAFTLSHLESHR
DGQRSSIMDVRSRVDSKTLTRNTRIIAEALTRVIYNLTEKGTPPDMPVFTEQMQIQQE
QLDSVMDWLTNQPRAAQLVDKDSTFLSTLEHHLSRYLKDVKQHHVKADKRDPEFVFYD
QLKQVMNAYRVKPAVFDLLLAVGIAAYLGMAYVAVQHFSLLYKTVQRLLVKAKTQ"
BASE COUNT 439 a 773 c 709 g 385 t
ORIGIN
1 caaggtcacg tcctgtcccc acctttcgcc cctcacccca gctcccccaa cgccaaagac
61 aaggttaaga aagtgatatc gcgaaatagt tttttaaagc attttattgc attttatgac
121 ttggagttta tgtgaaacct caacggtatt agccgaacag cctgccgcac cttccgggag
181 ttccagagtg ggcctacaac tcccacaggg ctccgcgagc gccggacgga cagactacaa
241 ttcccgacag gcagcgcggc tggcggggcg gttcgcggcg gtgcccacag gacctcaggg
301 cgagtgcggg ctgccccgcg cggcgcccgc aggaccccgg cggctaccca tgccgaggtg
361 agtccgcggg agccgccgcc gccgccgtcc cgtcccagct gccgccccgc gcggccccgc
421 cgccggccag gatgctggag gaagcgggcg aggtgctgga gaacatgctg aaggcgtctt
481 gtctgcctct cggcttcatc gtcttcctgc ccgctgtgct gctgctggtg gcgccgccgc
541 tgcctgccgc cgacgccgcg cacgagttca ccgtgtaccg catgcagcag tacgacctgc
601 agggccagcc ctacggcaca cggaatgcag tgctgaacac ggaggcgcgc acgatggcgg
661 cggaggtgct gagccgccgc tgcgtgctca tgcggctact ggacttctcc tacgagcagt
721 accagaaggc cctgcggcag tcggcgggcg ccgtggtcat catcctgccc agggccatgg
781 ccgccgtgcc ccaggacgtc gtccggcaat tcatggagat cgagccggag atgctggcca
841 tggagaccgc cgtccccgtg tactttgccg tggaggacga ggccctgctg tctatctaca
901 agcagaccca ggctgcctcc gcctcccagg gctccgcctc tgctgctgaa gtactgctgc
961 gcacggccac tgccaacggc ttccagatgg tcaccagcgg ggtacagagc aaggccgtga
1021 gtgactggct gattgccagc gtggaggggc ggctgacggg gctgggcgga gaggaccttc
1081 ccaccatcgt catcgtggcc cactacgacg cctttggagt ggccccctgg ctgtcgctgg
1141 gcgcggactc caacgggagc ggcgtctctg tgctgctgga gctggcacgc ctcttctccc
1201 ggctctacac ctacaagcgc acgcacgccg cctacaacct cctgttcttt gcgtctggag
1261 gaggcaagtt taactaccag ggaaccaagc gctggctgga agacaacctg gaccacacag
1321 actccagcct gcttcaggac aatgtggcct tcgtgctgtg cctggacacc gtgggccggg
1381 gcagcagcct gcacctgcac gtgtccaagc cgcctcggga gggcaccctg cagcacgcct
1441 tcctgcggga gctggagacg gtggccgcgc accagttccc tgaggtacgg ttctccatgg
1501 tgcacaagcg gatcaacctg gcggaggacg tgctggcctg ggagcacgag cgcttcgcca
1561 tccgccgact gcccgccttc acgctgtccc acctggagag ccaccgtgac ggccagcgca
1621 gcagcatcat ggacgtgcgg tcccgggtgg attctaagac cctgacccgt aacacgagga
1681 tcattgcaga ggccctgact cgagtcatct acaacctgac agagaagggg acacccccag
1741 acatgccggt gttcacagag cagatgcaga tccagcagga gcagctggac tcggtgatgg
1801 actggctcac caaccagccg cgggccgcgc agctggtgga caaggacagc accttcctca
1861 gcacgctgga gcaccacctg agccgctacc tgaaggacgt gaagcagcac cacgtcaagg
1921 ctgacaagcg ggacccagag tttgtcttct acgaccagct gaagcaagtg atgaatgcgt
1981 acagagtcaa gccggccgtc tttgacctgc tcctggctgt tggcattgct gcctacctcg
2041 gcatggccta cgtggctgtc cagcacttca gcctcctcta caagaccgtc cagaggctgc
2101 tcgtgaaggc caagacacag tgacacagcc acccccacag ccggagcccc cgccgctcca
2161 cagtccctgg ggccgagcac gagtgagtgg acactgcccc gccgcgggcg gccctgcagg
2221 gacaggggcc ctctccctcc ccggcggtgg ttggaacact gaattacaga gcttttttct
2281 gttaaaaaaa aaaaaaaaaa aaaaaa
//