LOCUS BC013278 1503 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens TRIO and F-actin binding protein, mRNA (cDNA clone
IMAGE:3639826), partial cds.
ACCESSION BC013278
VERSION BC013278.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1503)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1503)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC013278.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: a Column: 2.
FEATURES Location/Qualifiers
source 1..1503
/db_xref="H-InvDB:HIT000036181"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3639826"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1503
/gene="TRIOBP"
/gene_synonym="dJ37E16.4"
/gene_synonym="HRIHFB2122"
/gene_synonym="KIAA1662"
/gene_synonym="Tara"
/db_xref="GeneID:11078"
/db_xref="HGNC:HGNC:17009"
/db_xref="IMGT/GENE-DB:17009"
/db_xref="MIM:17009"
CDS <1..1140
/gene="TRIOBP"
/gene_synonym="dJ37E16.4"
/gene_synonym="HRIHFB2122"
/gene_synonym="KIAA1662"
/gene_synonym="Tara"
/codon_start=1
/product="TRIOBP protein"
/protein_id="AAH13278.2"
/db_xref="GeneID:11078"
/db_xref="HGNC:HGNC:17009"
/db_xref="IMGT/GENE-DB:17009"
/db_xref="MIM:17009"
/translation="RKWFEATDSRTPEVPAGEGPRRGLGAPLTEDQQNRLSEEIEKKW
QELEKLPLRENKRVPLTALLNQSRGERRGPPSDGHEALEKEVQALRAQLEAWRLQGEA
PQSALRSQEDGHIPPGYISQEACERSLAEMESSHQQVMEELQRHHERELQRLQQEKEW
LLAEETAATASAIEAMKKAYQEELSRELSKTRSLQQGPDGLRKQHQSDVEALKRELQV
LSEQYSQKCLEIGALMRQAEEREHTLRRCQQEGQELLRHNQELHGRLSEEIDQLRGFI
ASQGMGNGCGRSNERSSCELEVLLRVKENELQYLKKEVQCLRDELQMMQKDKRFTSGK
YQDVYVELSHIKTRSEREIEQLKEHLRLAMAALQEKESMRNSLAE"
BASE COUNT 378 a 439 c 459 g 227 t
ORIGIN
1 cgcaagtggt ttgaggccac agacagcagg accccagagg tgcctgctgg tgaggggccg
61 cgccggggcc tgggtgcccc cctgactgag gaccagcaaa accggcttag tgaggagatc
121 gagaagaagt ggcaggagct ggagaagctg cccctgcggg agaataagcg ggtgcccctc
181 actgccctgc tcaaccaaag ccgcggagag cgccgagggc ccccaagtga cggccacgag
241 gcactggaga aggaggttca ggctcttcgg gcccagctgg aggcgtggcg tctccaaggg
301 gaggctcctc agagtgcact gagatcccag gaggatggcc acatcccccc gggctacatc
361 tcacaggagg catgtgagcg cagcctggca gagatggagt cctcgcacca gcaggtgatg
421 gaggagctgc agcggcacca cgagcgggag ctgcagcgcc tgcagcagga gaaggagtgg
481 ctcctggctg aggagacggc agccacggcc tcagccattg aagccatgaa gaaggcctat
541 caggaagagc tgagccgaga gctgagcaaa acacggagtc tccagcaggg cccggatggc
601 ctccggaagc agcaccagtc agatgtggag gcactgaagc gagagctgca ggtgctatcg
661 gagcagtact cgcagaagtg cctggagatt ggggcactca tgcggcaggc tgaggagcgc
721 gagcacacgc tgcgccgctg ccagcaggag ggccaggagc tgctgcgcca caaccaggag
781 ctgcatggcc gcctgtcaga ggagatagac cagctgcgcg gcttcattgc ctcgcagggc
841 atgggcaatg gctgcgggcg cagcaacgag cggagttcct gcgagctaga ggtgctgctt
901 cgcgtaaaag aaaacgaact ccagtaccta aagaaggagg tgcagtgcct ccgggacgag
961 ctccagatga tgcagaagga caagcgcttc acctcgggaa agtaccagga cgtctatgtg
1021 gagctgagcc acatcaagac acggtctgag cgggagatcg agcagctgaa ggagcacctg
1081 cgtcttgcca tggccgccct ccaggagaag gagtcgatgc gcaacagcct ggctgagtag
1141 aggtcccgcc cagctgcaga ccctccaggc tggaggacca gccgccctcc ttccctcctg
1201 gatggaagta aaaagccaag ctttctcccc accctctgtg ggccacacgt gcacttgcac
1261 ccaccacaca cacacacaca cacacacaca cacagacaca cagacacata cgcacacacg
1321 tgcacacatg tacacacgga tacacacaca cacacacaca cacacactgc atatctgagc
1381 gcgcccctcg cactgggtct caccttgcac cttcttcagg attttatatg tgaagagatt
1441 tttatataga tttttttcct ttttttccaa aacactttat actttaaaaa aaaaaaaaaa
1501 aaa
//