LOCUS BC013205 2038 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens DPH1 homolog (S. cerevisiae), mRNA (cDNA clone
IMAGE:4155628), with apparent retained intron.
ACCESSION BC013205
VERSION BC013205.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2038)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2038)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: c Column: 12
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2038
/db_xref="H-InvDB:HIT000088041"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4155628"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 351 a 683 c 554 g 450 t
ORIGIN
1 ctttgggccg ccagggcagt cctaagatcc tggagcacct ggaatctcga ctccgagcct
61 tgggcctttc ctttgtgagg ctgctgctct ctgagatctt ccccagcaag cttagcctac
121 ttcccgaggt ggatgtgtgg gtgcaggtgg catgtccacg tctctccatt gactggggca
181 cagccttccc caagccgctg ctgacaccct atgaggcggc cgtggctctg agggacattt
241 cctggcagca gccctacccg atggacttct acgctggcag ctccttgggg ccctggacgg
301 tgaaccacgg ccaggaccgc cgtccccacg ccccgggccg gcccgcgcgg gggaaggtgc
361 aggaggggtc cgcgcgtccc ccttcggccg tggcttgcga ggactgcagc tgcagggacg
421 agaaggtggc gccgctggct ccttgacgcg ctcccgggcc tcaggtatca gcccccgctc
481 tgggtgcgcc ccgccttttg ccgttgtcat gggaacgccg tggcgctccg aggcccgccc
541 tcggggcggt gctgacgttc ggttccgccc cgtgcattgt gcttccgctc ggggaaagac
601 cgcttccggt gcttccgtcg ctccttgccg ggcataatgg ccgcgcagcg acccctgcgg
661 gtcctgtgcc tggcgggctt ccggcagagc gagcggggct tccgtgagaa gaccggggcg
721 ctgaggaagg cgctgcgggg tcgcgccgag ctcgtgtgcc tcagcggccc gcacccggtc
781 cccgaccccc cgggccccga gggcgccaga tcagacttcg gtgagacaag ccccgctccg
841 gaaacgcact cagtttcctc catcttgttt cgtccccctc gacacccttc agcatccccc
901 accctgcgtc caccctcatt cctcccaccc agtccacacc cttcatttct cgcgacccat
961 accctctttg ctcaaactgc agcctgtctt cccaggcttc cgccttcacc gtcttcctcc
1021 gctgtctcct gttcaggcta atccactcat ttcccccctc tcatttcccc cagacttttg
1081 cctcgattcc ctttttctct ctgtcatctc gaaccctcct gccctttctc atttctttcc
1141 ttcctggagc ctcccatgcc ctaatcccat cctttttcct catatcgctg tagggtcctg
1201 ccctccggag gagcagcctc gaggctggtg gttttcagag caggaggccg acgttttctc
1261 cgcattggaa gagcccgccg tctgcagggg cctggaggaa tcactgggga tggtggcaca
1321 ggcactgaac aggctggggc cttttgacgg ccttcttggt ttcagccaag gggctgcgct
1381 agcagccctt gtgtgtgccc tgggccaggc aggcgatccc cgcttcccct tgccacggtt
1441 tatcctcttg gtgtctggtt tctgtccccg gggcattggg ttcaaggaat ccatcctgca
1501 aaggcccttg tcattgcctt cgctccatgt ttttggggac actgacaaag tcatcccctc
1561 tcaggagagt gtgcaactgg ccagccaatt tcccggagcc atcaccctca cccactctgg
1621 tggccacttc attccagcag ctgcacccca gcgtcaggcc tacctcaagt tcttggacca
1681 gtttgcagag tgaaagatca agaaatgtct ctgctcctac atccagctcc tctaggggca
1741 gcctccgtca tccatgccct cccaggaccc tccactcact gctgtgagtg cgcctcagca
1801 gaaccagtta agagacaact atcaattctt gagacccaaa ttataagggc cctgccctgt
1861 actgaagaaa aggggagcac aaggccttaa tggacattga cttgtgaaaa cgcaaacatg
1921 aatatggttg gagagccctg gattaggagg gtgacatggg gaaggcagag gctggcacca
1981 tggtgactgc cacataataa agtggtgatt tggaaaaaaa aaaaaaaaaa aaaaaaaa
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