LOCUS BC013200 2182 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens lymphocyte-specific protein tyrosine kinase, mRNA (cDNA clone MGC:17196 IMAGE:4341278), complete cds. ACCESSION BC013200 VERSION BC013200.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2182) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2182) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: j Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20428651. FEATURES Location/Qualifiers source 1..2182 /db_xref="H-InvDB:HIT000036178" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17196 IMAGE:4341278" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2182 /gene="LCK" /gene_synonym="p56lck" /gene_synonym="pp58lck" /gene_synonym="YT16" /db_xref="GeneID:3932" /db_xref="HGNC:HGNC:6524" /db_xref="MIM:153390" CDS 101..1720 /gene="LCK" /gene_synonym="p56lck" /gene_synonym="pp58lck" /gene_synonym="YT16" /codon_start=1 /product="LCK protein" /protein_id="AAH13200.1" /db_xref="GeneID:3932" /db_xref="HGNC:HGNC:6524" /db_xref="MIM:153390" /translation="MGCGCSSHPEDDWMENIDVCENCHYPIVPLDGKGTLLIRNGSEV RDPLVTYEGSNPPASPLQDNLVIALHSYEPSHDGDLGFEKGEQLRILEQSGEWWKAQS LTTGQEGFIPFNFVAKANSLEPEPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTA GSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLHELVRHYTNASDGLCT RLSRPCQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENDTLLDSQLEEKGL GASPWGNLGQQLLLLPTGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK ERPEDRPTFDYLRSVLEDFFTATEGQYQPQP" BASE COUNT 495 a 611 c 616 g 460 t ORIGIN 1 gagggctcag agggagcacc ggtttggagc tgggaccccc tattttagct tttctgtggc 61 tggtgaatgg ggatcccagg atctcacaat ctcagggacc atgggctgtg gctgcagctc 121 acacccggaa gatgactgga tggaaaacat cgatgtgtgt gagaactgcc attatcccat 181 agtcccactg gatggcaagg gcacgctgct catccgaaat ggctctgagg tgcgggaccc 241 actggttacc tacgaaggct ccaatccgcc ggcttcccca ctgcaagaca acctggttat 301 cgctctgcac agctatgagc cctctcacga cggagatctg ggctttgaga agggggaaca 361 gctccgcatc ctggagcaga gcggcgagtg gtggaaggcg cagtccctga ccacgggcca 421 ggaaggcttc atccccttca attttgtggc caaagcgaac agcctggagc ccgaaccctg 481 gttcttcaag aacctgagcc gcaaggacgc ggagcggcag ctcctggcgc ccgggaacac 541 tcacggctcc ttcctcatcc gggagagcga gagcaccgcg ggatcgtttt cactgtcggt 601 ccgggacttc gaccagaacc agggagaggt ggtgaaacat tacaagatcc gtaatctgga 661 caacggtggc ttctacatct cccctcgaat cacttttccc ggcctgcatg aactggtccg 721 ccattacacc aatgcttcag atgggctgtg cacacggttg agccgcccct gccagaccca 781 gaagccccag aagccgtggt gggaggacga gtgggaggtt cccagggaga cgctgaagct 841 ggtggagcgg ctgggggctg gacagttcgg ggaggtgtgg atggggtact acaacgggca 901 cacgaaggtg gcggtgaaga gcctgaagca gggcagcatg tccccggacg ccttcctggc 961 cgaggccaac ctcatgaagc agctgcaaca ccagcggctg gttcggctct acgctgtggt 1021 cacccaggag cccatctaca tcatcactga atacatggag aatgacacac ttctagactc 1081 ccagttggag gagaaaggtc tgggggcctc cccctggggc aacttgggcc agcaactctt 1141 gcttctgccc acagggagtc tagtggattt tctcaagacc ccttcaggca tcaagttgac 1201 catcaacaaa ctcctggaca tggcagccca aattgcagaa ggcatggcat tcattgaaga 1261 gcggaattat attcatcgtg accttcgggc tgccaacatt ctggtgtctg acaccctgag 1321 ctgcaagatt gcagactttg gcctagcacg cctcattgag gacaacgagt acacagccag 1381 ggagggggcc aagtttccca ttaagtggac agcgccagaa gccattaact acgggacatt 1441 caccatcaag tcagatgtgt ggtcttttgg gatcctgctg acggaaattg tcacccacgg 1501 ccgcatccct tacccaggga tgaccaaccc ggaggtgatt cagaacctgg agcgaggcta 1561 ccgcatggtg cgccctgaca actgtccaga ggagctgtac caactcatga ggctgtgctg 1621 gaaggagcgc ccagaggacc ggcccacctt tgactacctg cgcagtgtgc tggaggactt 1681 cttcacggcc acagagggcc agtaccagcc tcagccttga gaggccttga gaggccctgg 1741 ggttctcccc ctttctctcc agcctgactt ggggagatgg agttcttgtg ccatagtcac 1801 atggcctatg cacatatgga ctctgcacat gaatcccacc cacatgtgac acatatgcac 1861 cttgtgtctg tacacgtgtc ctgtagttgc gtggactctg cacatgtctt gtacatgtgt 1921 agcctgtgca tgtatgtctt ggacactgta caaggtaccc ctttctggct ctcccatttc 1981 ctgagaccac agagagaggg gagaagcctg ggattgacag aagcttctgc ccacctactt 2041 ttctttcctc agatcatcca gaagttcctc aagggccagg actttatcta atacctctgt 2101 gtgctcctcc ttggtgcctg gcctggcaca catcaggagt tcaataaatg tctgttgatg 2161 actgttaaaa aaaaaaaaaa aa //