LOCUS BC013172 1665 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat and SOCS box-containing 9, mRNA (cDNA
clone MGC:8847 IMAGE:3917449), complete cds.
ACCESSION BC013172
VERSION BC013172.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1665)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1665)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13443013.
FEATURES Location/Qualifiers
source 1..1665
/db_xref="H-InvDB:HIT000036162"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8847 IMAGE:3917449"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1665
/gene="ASB9"
/gene_synonym="DKFZp564L0862"
/gene_synonym="FLJ20636"
/gene_synonym="MGC4954"
/db_xref="GeneID:140462"
/db_xref="HGNC:HGNC:17184"
CDS 248..1132
/gene="ASB9"
/gene_synonym="DKFZp564L0862"
/gene_synonym="FLJ20636"
/gene_synonym="MGC4954"
/codon_start=1
/product="ankyrin repeat and SOCS box-containing 9"
/protein_id="AAH13172.1"
/db_xref="GeneID:140462"
/db_xref="HGNC:HGNC:17184"
/translation="MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAA
IHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW
HTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNI
DHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLL
MDFGADTQAKNAEGKRPVELVPPESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHH
KITKLVLPEDLKQFLLHL"
BASE COUNT 421 a 356 c 426 g 462 t
ORIGIN
1 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt acacgagcgc gtgcctctct
61 ctgatcacag gtagcactca gattaccctg cctgctctgt gctttgctgc agaccatttg
121 accagaacgt gtgcagctca gccagccaca gaactggaat ttttcaggag cagggggagc
181 atggagtttg gactttgctg agcaactgaa gtggagcgca gagcttgctc gcttaggaga
241 gagcatcatg gatggcaaac aagggggcat ggatgggagc aagcccgcgg ggccaaggga
301 ctttcctggc atcaggcttc tttcaaaccc attgatgggc gatgctgtgt ctgattggtc
361 tcctatgcat gaagctgcaa tccacggaca tcagctgtct ctgaggaacc tcatcagcca
421 ggggtgggct gtgaacatca tcacggcaga tcatgtttcc ccactccatg aagcctgtct
481 tggaggtcat ctctcttgtg tgaagatttt attaaagcat ggagctcagg tgaatggtgt
541 gacagcagac tggcacactc cactgtttaa tgcttgtgtc agcggcagct gggattgtgt
601 gaatttgctt ctgcagcacg gagccagcgt tcaacctgag agtgatctgg catcccccat
661 ccatgaagct gctaggagag gccacgtgga gtgtgtcaac tctcttatag cttatggggg
721 caacattgac cataagatca gccacctggg cactccactc tatttggctt gtgaaaacca
781 acagagagcc tgtgtcaaga agcttctgga gtcaggagcg gacgtgaacc aagggaaagg
841 tcaggattcc ccacttcatg cagtggccag gacagccagt gaagagctgg cctgcctgct
901 catggatttt ggagcggaca cccaggccaa gaatgctgaa ggcaaacgtc ctgtggagct
961 ggtgcctcca gagagcccct tggcccagct cttcttggag agagaagggc ccccttcttt
1021 gatgcagtta tgccgcctta gaattcggaa gtgttttgga atccagcagc atcataagat
1081 aaccaaactc gtcctcccag aggatctgaa acagtttctc ctacatcttt aaatgcatct
1141 agggaatgga ttcacaaacg atgtgaaaac attattgagt gttgtagcca ctagaatttt
1201 aaaatcaagt tggatttata gagtttgact agttttttcg attagatttg tatttgttat
1261 aaacttgttt atggagtttg actaattttt tctattcaat ttgtatttgt taaactcaag
1321 ccagggtgga aagacactgc atacgtttgt attattagtt agaaggcatg aagacttttt
1381 tccctgcttg gagagtgtca taagttattg ttttgcatat ctactgcatg ccaagcactt
1441 tctgcatcat ctaatttagc cctcacagcc actgggtcaa gatgtccaat tttccagagt
1501 aaggatagag gagtcaaatt caaatacagg ttttctgaca ttaacttatg tgatgacttg
1561 atcgaggcag gcttttccag catcactgtc ctggttccat ctctgctata tgggaatgaa
1621 aataaagaaa catatttctt ggcttgtcta aaaaaaaaaa aaaaa
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