LOCUS BC013145 3157 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens TBC1 domain family, member 5, mRNA (cDNA clone MGC:21104 IMAGE:4510019), complete cds. ACCESSION BC013145 VERSION BC013145.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3157) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3157) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 28 Row: h Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7661997. FEATURES Location/Qualifiers source 1..3157 /db_xref="H-InvDB:HIT000036148" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21104 IMAGE:4510019" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3157 /gene="TBC1D5" /gene_synonym="KIAA0210" /db_xref="GeneID:9779" CDS 178..2565 /gene="TBC1D5" /gene_synonym="KIAA0210" /codon_start=1 /product="TBC1D5 protein" /protein_id="AAH13145.1" /db_xref="GeneID:9779" /translation="MYHSLSETRHPLQPEEQEVGIDPLSSYSNKSGGDSNKNGRRTSS TLDSEGTFNSYRKEWEELFVNNNYLATIRQKGINGQLRSSRFRSICWKLFLCVLPQDK SQWISRIEELRAWYSNIKEIHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELR SMIEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVLH CDHQAFLHASESAQPSEEMKTVLNPEYLEHDAYAVFSQLMETAEPWFSTFEHDGQKGK ETLMTPIPFARPQDLGPTIAIVTKVNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRW VRLLFGREFPLQDLLVVWDALFADGLSLGLVDYIFVAMLLYIRDALISSNYQTCLGLL MHYPFIGDVHSLILKALFLRDPKRNPRPVTYQFHPNLDYYKARGADLMNKSRTNAKGA PLNINKVSNSLINFGRKLISPAMAPGSAGGPVPGGNSSSSSSVVIPTRTSAEAPSHHL QQQQQQQRLMKSESMPVQLNKGLSSKNISSSPSVESLPGGREFTGSPPSSATKKDSFF SNISRSRSHSKTMGRKESEEELEAQISFLQGQLNDLDAMCKYCAKVMDTHLVNIQDVI LQENLEKEDQILVSLAGLKQIKDILKGSLRFNQSQLEAEENEQITIADNHYCSSGQGQ GRGQGQSVQMSGAIKQASSETPGCTDRGNSDDFILISKDDDGSSARGSFSGQAQPLRT LRSTSGKSQAPVCSPLVFSDPLMGPASASSSNPSSSPDDDSSKDSGFTIVSPLDI" misc_feature 412..1329 /gene="TBC1D5" /gene_synonym="KIAA0210" /note="TBC; Region: Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs. Widespread domain present in Gyp6 and Gyp7, thereby giving rise to the notion that it performs a GTP-activator activity on Rab-like GTPases" /db_xref="CDD:smart00164" BASE COUNT 934 a 759 c 685 g 779 t ORIGIN 1 agcccttctg cgccacagag atggggtctc actctgtcat ccaggctgga atatagtggc 61 acaatcatag cccattgtag cctccatctc aaggactcag gggatcctcc cttctaggcc 121 tcccaagtag ctgggattac aggtagttac ttttggtgac gctgtccagt tcccacaatg 181 tatcattcct tatctgaaac tagacatcct ctgcagccag aagaacaaga agtaggcatt 241 gaccccttgt ccagttactc taacaagtct ggaggagatt caaataaaaa tggaagaaga 301 acaagttcta ctttagactc tgaagggact tttaattcct ataggaaaga atgggaagaa 361 ctatttgtaa acaacaatta cttggcaaca ataaggcaga aggggattaa tgggcagctg 421 agaagcagca ggttccgcag catttgctgg aagctatttc tttgtgttct tcctcaagac 481 aaaagtcaat ggataagtag aattgaagaa ttaagagcat ggtatagcaa cattaaagaa 541 atacatatta ccaacccgag gaaggttgtt ggccaacaag atttgatgat caataatcct 601 ctttcacagg atgaagggag tctttggaac aaattcttcc aagataaaga acttcgatca 661 atgattgaac aagatgtcaa aagaacgttt cctgaaatgc agtttttcca gcaagaaaat 721 gtgagaaaaa ttcttacaga tgttcttttc tgttatgcca gagaaaacga gcagttgctt 781 tataaacagg gcatgcacga actgttagca cctatagtct ttgtccttca ctgtgaccac 841 caagcttttc tacatgccag tgagtctgca cagcccagtg aggaaatgaa aactgtcttg 901 aaccctgagt atctggaaca tgatgcctat gcagtgttct cacaacttat ggaaactgct 961 gaaccttggt tttcaacttt tgagcatgat ggtcagaagg ggaaagaaac actgatgact 1021 cccattccct ttgctagacc acaagattta gggccaacaa ttgctattgt tactaaagtc 1081 aaccagatcc aggatcatct actgaagaag catgatattg agctttacat gcacttgaac 1141 agactagaaa ttgcaccaca gatatatggg ttaaggtggg tgcggctgct atttggacga 1201 gagttccccc tgcaggacct tctggtggtc tgggatgcct tgtttgcaga cggcctcagc 1261 ctgggtttag tagattatat cttcgtagcc atgttacttt acatccgaga tgctttgatc 1321 tctagtaact accagacctg tctcggcctt ctgatgcatt acccattcat cggggatgta 1381 cactcactga ttcttaaggc tctgttcctt agagatccaa agagaaatcc aagaccagtg 1441 acttatcaat tccatccaaa tttagattat tacaaagcac gaggagcaga cctcatgaat 1501 aaaagccgga ccaatgccaa aggtgctccc ctgaatataa ataaggtctc taatagcctg 1561 attaattttg gaagaaagtt gatttcccca gcaatggctc caggcagtgc aggtggccct 1621 gtacctggag gcaacagcag tagctcctcc tctgttgtaa ttcctaccag gacctcagca 1681 gaggccccaa gccatcactt gcaacagcaa cagcagcagc agaggctgat gaaatcagaa 1741 agcatgcctg tgcaattgaa caaagggcta agttctaaaa acatcagttc atctccaagc 1801 gttgagagtt tgcctggagg aagagaattc actggctctc caccttcatc tgctactaaa 1861 aaagattcct tttttagcaa catctcacgt tctcgctcac acagcaaaac tatgggcaga 1921 aaagaatctg aagaagaatt agaagcccaa atttccttcc ttcaagggca gttgaatgac 1981 ctggatgcca tgtgcaaata ctgtgcaaag gtgatggaca ctcatcttgt aaatattcaa 2041 gatgtgatat tacaagaaaa tttggaaaaa gaagatcaaa ttctggtttc cctggcagga 2101 ttaaaacaga tcaaagacat tctaaaaggt tccctgcgtt ttaaccagag ccagctagag 2161 gccgaagaga acgaacagat caccattgcg gacaaccact actgctccag cggccagggc 2221 cagggccgag gccaaggcca gagcgttcaa atgtcagggg ccattaaaca ggcctcttca 2281 gaaacgccag ggtgcactga tagagggaat tccgatgact tcatcctgat ttccaaagat 2341 gatgatggga gcagtgccag gggctccttc tccggccagg cccagcctct tcgcaccctc 2401 agaagcacct ctgggaaaag ccaggcccca gtctgctccc cactggtgtt ctcagatcca 2461 ctgatgggcc cagcctcagc ttcctccagc aaccccagct ccagtcctga tgacgacagc 2521 agcaaggact ctggcttcac cattgtgagt cccctggaca tctgaccaca gtgcccagtc 2581 ctgccccaca gggatctagc cacccttcag tggccccaag gccagactga ggctcatcca 2641 gtggagaacc ttcttaaacc actgcttcct tcccggcatg cattttgcat tggtccagcc 2701 ctttgaaacc ccttagagag aagcatatat ggccacaaag cacagaggct taggtttgcc 2761 acatgcagac agggctttct gggcccttac ctaatcccca cccgactctt gctctgagtt 2821 agagctgagt tacgtaccca gtatcacact cacagttaga aaagaccgaa tcacaattta 2881 gaatcacttt tcctctgtcc ccttctcccc agctaagaat gtgtggcacc tccatcagtt 2941 atacttagaa ggagcagaaa tagttatttt cgtatcttct atccctcaaa gcatcagaca 3001 tgggaaaatt ggtttatacc aagaaagctt cctctgtgga aatctgtctc agcctacttt 3061 attcctgcat tgggaagcca tatcgcagag ctaaatgcaa tagaatgaac cagaactagt 3121 ggattccagg gctgggggaa aaaaaaaaaa aaaaaaa //