LOCUS BC013130 2123 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ceroid-lipofuscinosis, neuronal 6, late infantile, variant, mRNA (cDNA clone MGC:21605 IMAGE:4517748), complete cds. ACCESSION BC013130 VERSION BC013130.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2123) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2123) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 28 Row: i Column: 24. FEATURES Location/Qualifiers source 1..2123 /db_xref="H-InvDB:HIT000036139" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21605 IMAGE:4517748" /tissue_type="Bladder, transitional cell papilloma" /clone_lib="NIH_MGC_93" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2123 /gene="CLN6" /gene_synonym="FLJ20561" /gene_synonym="HsT18960" /db_xref="GeneID:54982" /db_xref="HGNC:HGNC:2077" /db_xref="MIM:606725" CDS 10..945 /gene="CLN6" /gene_synonym="FLJ20561" /gene_synonym="HsT18960" /codon_start=1 /product="ceroid-lipofuscinosis, neuronal 6, late infantile, variant" /protein_id="AAH13130.1" /db_xref="GeneID:54982" /db_xref="HGNC:HGNC:2077" /db_xref="MIM:606725" /translation="MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFH LDLWFYFTLQNWVLDFGRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIE RSPRTLPRSITYVSIIIFIMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPE TLIDSFELLYYYDEYLGHCMWYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSG LYYWYLVTEGQIFILFIFTFFAMLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALW VAWLWNDPVLRKKYPGVIYVPEPWAFYTLHVSSRH" BASE COUNT 399 a 651 c 585 g 488 t ORIGIN 1 ggggcagcca tggaggcgac gcggaggcgg cagcacctgg gagcgacggg cggcccaggc 61 gcgcagctgg gcgcctcctt cctgcaggcc aggcatggct ctgtgagcgc tgatgaggct 121 gcccgcacgg ctcccttcca cctcgacctc tggttctact tcacactgca gaactgggtt 181 ctggactttg ggcgtcccat tgccatgctg gtattccctc tcgagtggtt tccactcaac 241 aagcccagtg ttggggacta cttccacatg gcctacaacg tcatcacgcc ctttctcttg 301 ctcaagctca tcgagcggtc cccccgcacc ctgccacgct ccatcacgta cgtgagcatc 361 atcatcttca tcatgggtgc cagcatccac ctggtgggtg actctgtcaa ccaccgcctg 421 ctcttcagtg gctaccagca ccacctgtct gtccgtgaga accccatcat caagaatctc 481 aagccggaga cgctgatcga ctcctttgag ctgctctact attatgatga gtacctgggt 541 cactgcatgt ggtacatccc cttcttcctc atcctcttca tgtacttcag cggctgcttt 601 actgcctcta aagctgagag cttgattcca gggcctgccc tgctcctggt ggcacccagt 661 ggcctgtact actggtacct ggtcaccgag ggccagatct tcatcctctt catcttcacc 721 ttcttcgcca tgctggccct cgtcctgcac cagaagcgca agcgcctctt cctggacagc 781 aacggcctct tcctcttctc ctccttcgca ctgaccctct tgcttgtggc gctctgggtc 841 gcctggctgt ggaatgaccc tgttctcagg aagaagtacc cgggtgtcat ctacgtccct 901 gagccctggg ctttctacac ccttcacgtc agcagtcggc actgagtccc tggcaccagg 961 ctctggcgct ctgctgggtg ggagggtggg ccatggaggg catctgaata caggagtagg 1021 gggggtgtgg gtgtgtaacc agagaccgag agcatgagtg gggtgtgcct cgtgtgcgtg 1081 gattcgtgtg tgtgtgtgtg tcttgtatat gtgtgcgcag agtgcatcat tttcagactc 1141 tactatttcc gtcaagtttc tgtttgattt ggatcatctc aggatcggat tctgttttag 1201 agtgtttctg ggccaggatc cgggcccctg ccctcctctg cacctgacca cactccctac 1261 tcagggctag tctgttcttc ccggacatct tctggtagcc gtgcaggaga gggctgggtg 1321 gggcagaggc caggagggga cctggtgtgt cacctgccca ccacctggct catccctcag 1381 gcccaccctg accctacatt acataggtta cgtcagccta ctgtggctgt tgagcaaagc 1441 atttctcctt tctgggcctc atttgcacta gatgggcctg tggtcccaaa gtaggtcagt 1501 aggttggggt tgctgacacc ccttgggtgc agctttggga cagatgagtg gctctgtcct 1561 gtcactgccc tctccctgcc tgggggctat gtgcactcca gacccctgcc caggctcagg 1621 cccatgaggt atggagacac cctggccccc aggagctgga ggcaccgccc actcccctgg 1681 cattccagct ttgcaggtga ccctcctcta cccaaagctc tgtccccctg ctcccactcc 1741 agaagaactg cggcacgtgc ttcgggcagc ctagccacag gctttgagcg cctgcattcc 1801 tgggggctgg agggtggggt gccaaaggcc ctgagcaaaa gccagagctc ctctcatcaa 1861 agcctttaca aggtgctggg cccagaggct ttgccttgac agagtggccc agggtttcaa 1921 gggaggagga acctccccct acctaggacc cttcctgtgg ggggtctaca gagtcaggga 1981 cagaagggaa gggacccaca ggaagtcaca gtggtgccca gggatgtgtc agcccccagc 2041 cacggggacg cgggattcaa gaatgaagta aatacagtca cagccccaaa aaaaaaaaaa 2101 aaaaaaaaaa aaaaaaaaaa aaa //