LOCUS BC013084 3614 bp mRNA linear HUM 19-NOV-2003
DEFINITION Homo sapiens cDNA clone IMAGE:4153384, partial cds.
ACCESSION BC013084
VERSION BC013084.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3614)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3614
/db_xref="H-InvDB:HIT000088003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4153384"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 962 a 797 c 773 g 1082 t
ORIGIN
1 agttggtact ttcaaaataa gtgacatcca aatagtaact taatattcca aatatggctg
61 caaaacaaat tgtcgattat ggatgactac tactgccatc tctccatacc agtccatctt
121 ctgccaggct gtttggtctt gatttgtcga ccttttaggt ttctccccat gtattccaca
181 tgaccttcac caaccccact tctatctcca aacgtctttc tgagttgtgg ggatgcagat
241 gtattctgcc accatcacaa gggctaaccg agccctggct gcggatcttc attgttgttc
301 acattatttc cattcttaca ccctacttca tgtttgtaca ctattttctt acatttgctg
361 tctcttctaa acattctttg ctgcatccac tttttctcta tttgtgctct aggtgctgca
421 gaggctaatg ctgggtttcc tttcattcct ccttgcactc agcacctccc ttctcaattc
481 cttttgccat gtctccactt taaatcttaa cctactccag atagtctttt ccttcacact
541 attggcatct gtgcttgggt tgctttcagt ctattctctg atctatgatt tctttgcatg
601 atcaagaagg tgccatgaaa ggatccctta agaaagcctg tcatttagcc agaacgaact
661 agcttcatga tagcaccagg aagactgata tctcccagga aacaaaccac tcatggtggt
721 gctctttttg ccttcactat gaagtgtttg tctgcctgta tgtgaaaacg agagggttta
781 attgtaagga tgcagcacag attgggactg gcatcagaaa gccattgggg actgaggtag
841 ctctagagac cgctttctgt ctccagtgct ctccctcctg ggtgacatgt tttctgtctc
901 ctggcatctc tgcttctctc tatgggcttc tttattattt gcagcttgca atggtacccc
961 aaagtcctag ctcatggctc ctctctgcat atatgctttc tgttcctacc cacaaagctc
1021 tttctattct tctagtttaa attttcaaga gaagaaatct gatttttttt taacctggtc
1081 atgtcaaaga ccactgacca catatgagct ggttgccctg tgtcaagtgc ccccttctcc
1141 caccctcttc ccctccccat ctggtctgtc ataactgaat gatggagtgg gaaattgaaa
1201 ttgccatggg aattccatga taagctatct aaacagtttt atctataagt ggtagacaga
1261 gtcacttaga agggagtccc aggtgagaca ggcacctgtc aactccaaac tggcacacat
1321 tctaaggtct gcaacacccc agagagagca ctgattttgt agtggcctgt actggggcgg
1381 taggctggag aatgggagaa atagccactt cagaatcccc cagcccaaat gcatcaagct
1441 cactatagac tctgcagcca cgattcagct ggcttctgct cagatcaaca gaaaacattc
1501 ttagtgaatg atgcttgtgg cacatatctc aaggctacca gggtcatttc ttcccattta
1561 ctttttctct gatctatcct ctccaggaca ctagcgtcag aagataatct tccgtcgttt
1621 tcaggtacac tatttgggta ctgagtcact ttcaaagcct ctttctgggt ttggatttcc
1681 agagcagcct gtgctgtaaa gcaagacaga aagcttccct gccattcatg cctgccaggg
1741 atagaatgac agtactcctg aggctctccc tccccacccc tcccctgctg gacagctgat
1801 ctgctggact cagccagagc cagcaggcac cccctcttta tcctaggagc tgcaaacttg
1861 atgcctttcc aggaaatccc cagaagctgg agtatcctca tctacatgtg gcacagtgta
1921 tggttgtgtc aggtgctcat gtcccattgc ataggactgg ggtggaaaat agggaccgtc
1981 cttttgtgtc agctccagtc aatgagtagt ggccatccag ggggccatct tggaaaggac
2041 ttgtgaggct gtatctgcgc tcagttgtag atgtgagaag aaaaggccaa atatctgcca
2101 atcctagtcc tgggattcaa gatagaaaga actgcatgga gtgaagaaac taggagtctc
2161 catttcactg agatgcataa gaatgaaatt attgtcacta tttcttcaat actgggccaa
2221 tcctaataag aaaacccttt ttgagtctct cttttcttta tcctacatat aacacagaag
2281 ctttttctat tccctggatg aacccacagg gacagaaatt cttgttggac aggtgaagca
2341 gataatttct ttatcagact agaatcttcc agaagcactg ctaacctagt gagttttgta
2401 ctctagacag gtggttctca agccagctcc ccaccgcagg cctttttcat ggtctgcccc
2461 tccctgtgga acccatgttt taggttatta gctgataatt ggatttctat tttttctcat
2521 aaaatacagc aaaagatagc tagtgatatt atgatgagtt aatgtaatta tagccaaagc
2581 agagagaaac aacattttaa ttaacctgtg tggactgctg gaagaatata aactttctat
2641 tttgggggtt gagtagagac agaaatgaac acagccaagg gctgactgtc agaggacatt
2701 taactgatgt aaaatgcttt gaaattattg ggcactcatt gtttaaagtt gtttttgatg
2761 atggtaactc cgtaagggga tcagaacatg ctggaaagaa tgggcacagc tttggttacc
2821 tgggccttac cactgttatt caggcctctg agaaagctta ctattgttgt tatgtttctt
2881 acataataaa acttctaata tttgtatgaa aacatagaat tccactttta aagatgtaag
2941 gattttgtca taccattagg gttactatga tcacttgatt ctaggtctaa gaaatattaa
3001 gtaatttacc cgcgaacaca gagttttaag ggtaagtatc aaaaccttga tcttctaata
3061 ccacatattc tcactcatat gtgggagcta aaaatattga gctcaaaaag gtggagagta
3121 gaattgtagt tattagagga tgcgaaggag gatggggaga ggttggttaa tggatacaat
3181 gtgaagttat gtaagaggag taagttctag tgttttgtag cactgtaggg tgaatatggt
3241 taacagtaat ttagtgtata tttaaaaaaa aatagacagg attctgaata ttcacaaaga
3301 aatgataaat attcagctgg gcgtggttgc tcgcgcctat attcccagca ttttgggagg
3361 ccgaggtgga tggatcacct gaggtcagga gtttgagatc agcctggaca acatggtgaa
3421 accccgtctc tgctataaat acagaaaatt agctgggcat ggtggcgcac acctgtggtc
3481 ctagctactt aggaggctga ggcaggagag tcgcttgagc ctgggaggca gaggttgcag
3541 tgagccgaga tcacgccact gcactccagc ctgggtgaca gagtgacact ctgtctcaaa
3601 aaaaaaaaaa aaaa
//