LOCUS BC013042 1242 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens Rab interacting lysosomal protein-like 2, mRNA (cDNA
clone MGC:4797 IMAGE:3544761), complete cds.
ACCESSION BC013042
VERSION BC013042.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1242)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1242)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC013042.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450827.
FEATURES Location/Qualifiers
source 1..1242
/db_xref="H-InvDB:HIT000036097"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4797 IMAGE:3544761"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1242
/gene="RILPL2"
/db_xref="GeneID:196383"
/db_xref="HGNC:HGNC:28787"
CDS 87..722
/gene="RILPL2"
/codon_start=1
/product="Rab interacting lysosomal protein-like 2"
/protein_id="AAH13042.1"
/db_xref="GeneID:196383"
/db_xref="HGNC:HGNC:28787"
/translation="MEEPPVREEEEEEGEEDEERDEVGPEGALGKSPFQLTAEDVYDI
SYLLGRELMALGSDPRVTQLQFKVVRVLEMLEALVNEGSLALEELKMERDHLRKEVEG
LRRQSPPASGEVNLGPNKMVVDLTDPNRPRFTLQELRDVLQERNKLKSQLLVVQEELQ
CYKSGLIPPREGPGGRREKDAVVTSAKNAGRNKEEKTIIKKLFFFRSGKQT"
BASE COUNT 334 a 286 c 383 g 239 t
ORIGIN
1 cggaaagttt tgggtgccgg gaggaagtct aacctttggg agactccaag acagcagctc
61 cgaggtcggc gggggtctgg gtggccatgg aggagccccc tgtgcgagaa gaggaagagg
121 aggagggaga ggaggacgag gagagggacg aggttgggcc cgagggggcg ctgggcaaga
181 gccccttcca gctgaccgcc gaggacgtgt atgacatctc ctacctgttg ggccgcgagc
241 ttatggccct gggcagcgac ccccgggtga cgcagctgca gttcaaagtc gtccgcgtcc
301 tggagatgct ggaggcgctg gtgaatgagg gcagcctggc gctggaggag ctgaagatgg
361 agagggacca cctcaggaag gaggtggagg ggctgcggag acagagccct ccggccagcg
421 gggaggtgaa cctgggccca aacaaaatgg tggttgacct gacagatccc aaccgacccc
481 gcttcactct gcaggagcta agggatgtgc tgcaggaacg caacaaactc aagtcgcagc
541 tcctggtggt gcaggaagag ctgcagtgct acaagagtgg cctgattcca ccaagagaag
601 gcccaggagg aagaagagaa aaagatgctg tggttactag tgccaaaaat gctggcagga
661 acaaggagga gaagacaatc ataaaaaagc tgttcttttt tcgatcgggg aaacagacct
721 agatccaagg ccacaagtaa ggctatggct ctgattctag aagacaacct tccaagatgc
781 ctggcaaaac cacctccctg tgccacacag acacactagg cctgtgtatt tatttcccct
841 tcaaagcaga ctgaggaggg aggagacgag gttctcttgg catcactttc tccctggctg
901 cagaactaga cacccttgaa gatttggcct gggccagtga gactgaaatc aagaaaaaca
961 gaagggatgt gcagggtggg ggggtccact tcctgctccc atgtcaaccc ccagggcctc
1021 cagcgtgcag acgcgtgtcc tactcatctg ctcccacgga tgaccctggt cttcaatggt
1081 tagcagaagg gagaaaagaa agcaggaaaa tgtgctattg agattccagt ggtgacttca
1141 ctgatattta gtgaatattt gatttagcca acatgccttt ctttatgtga ttttgtatta
1201 aagtaaaatg atttttatac tttcaaaaaa aaaaaaaaaa aa
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