LOCUS BC012982 2648 bp mRNA linear HUM 25-MAR-2004 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 19, mRNA (cDNA clone IMAGE:3622495), partial cds. ACCESSION BC012982 VERSION BC012982.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2648) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2648) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC012982.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 24 Row: g Column: 17. FEATURES Location/Qualifiers source 1..2648 /db_xref="H-InvDB:HIT000087978" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3622495" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2648 /gene="ARHGEF19" /gene_synonym="FLJ33962" /db_xref="GeneID:128272" CDS <1..2122 /gene="ARHGEF19" /gene_synonym="FLJ33962" /codon_start=2 /product="ARHGEF19 protein" /protein_id="AAH12982.1" /db_xref="GeneID:128272" /translation="SRAGSWPHCPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRK MRVYQREEVPGCPEAHAVFLEPGQVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSA SELMTRLHSSLRLGRNSAARALISGSGTGAAREGKASGMEARSVEMSGDRVSRPAPGD SREGDWSEPRLDTQEEPPLGSRSTNERRQSRFLLNSVLYQEYSDVASARELRRQQREE EGPGDEAEGAEEGPGPPRANLSPSSSFRAQRSARGSTFSLWQDIPDVRGSGVLATLSL RDCKLQEAKFELITSEASYIHSLSVAVGHFLGSAELSECLGAQDKQWLFSKLPEVKST SERFLQDLEQRLEADVLRFSVCDVVLDHCPAFRRVYLPYVTNQAYQERTYQRLLLENP RFPGILARLEESPVCQRLPLTSFLILPFQRITRLKMLVENILKRTAQGSEDEDMATKA FNALKELVQECNASVQSMKRTEELIHLSKKIHFEGKIFPLISQARWLVRHGELVELAP LPAAPPAKLKLSSKAVYLHLFNDCLLLSRRKELGKFAVFVHAKMAELQVRDLSLKLQG IPGHVFLLQLLHGQHMKHQFLLRARTESEKQRWISALCPSSPQEDKEVISEGEDCPQV QCVRTYKALHPDELTLEKTDILSVRTWTSDGWLEGVRLADGEKGWVPQAYVEEISSLS ARLRNLRENKRVTSATSKLGEAPV" misc_feature 857..1390 /gene="ARHGEF19" /gene_synonym="FLJ33962" /note="RhoGEF; Region: Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases" /db_xref="CDD:smart00325" misc_feature 1571..1813 /gene="ARHGEF19" /gene_synonym="FLJ33962" /note="PH; Region: PH domain. PH stands for pleckstrin homology" /db_xref="CDD:pfam00169" misc_feature 1859..2035 /gene="ARHGEF19" /gene_synonym="FLJ33962" /note="SH3; Region: Src homology 3 domains" /db_xref="CDD:smart00326" BASE COUNT 540 a 795 c 824 g 489 t ORIGIN 1 cagcagggct ggcagctggc cacactgtcc tggtgcccag cccccagctc tggagggacc 61 ctggagtccc cgacacacac agccacagcg ccgggccagc cacggctcgg agaagaagtc 121 tgcctggcgc aagatgcggg tgtaccagcg tgaagaggtc cccggctgcc ccgaggccca 181 cgctgtcttc ctagagcctg gccaggtagt gcaagagcag gccctgagca cagaggagcc 241 cagggtggag ttgtctgggt ccacccgagt gagcctcgaa ggtcctgagc ggaggcgctt 301 ctcggcatcg gagctgatga cccggctgca ctcttctctg cgcctggggc ggaattcagc 361 agcccgggca ctcatctctg ggtcaggcac cggagcagcc cgggaaggga aagcatctgg 421 aatggaggct cgaagtgtag agatgagcgg ggaccgggtg tcgcggccag cccctggtga 481 ctcacgagag ggcgattggt ccgagcccag gctagacaca caggaagagc cgcctttggg 541 gtccaggagc accaacgagc ggcgccagtc tcgattcctc cttaactccg tcctctatca 601 ggaatacagc gacgtggcca gcgcccgcga actgcggcgg cagcagcgcg aggaggaggg 661 cccgggggac gaggccgagg gcgcagagga ggggccgggg ccgccgcggg ccaacctctc 721 ccccagcagc tccttccggg cgcagcgctc ggcgcgaggc tccaccttct cgctgtggca 781 ggatatcccc gacgtacgcg gcagcggcgt cctggccacg ctgagcctgc gggactgcaa 841 gctgcaggag gccaagtttg agctgatcac ctccgaggcc tcctacatcc acagcctgtc 901 ggtggctgtg ggccacttct taggctctgc cgagctgagc gagtgtctgg gggcgcagga 961 caagcagtgg ctgttttcca aactgcccga ggtcaagagc accagcgaga ggttcctgca 1021 ggacctggag cagcggctgg aggcagatgt gctgcgcttc agcgtgtgcg acgtggtgct 1081 ggaccactgc ccggccttcc gcagagtcta cctgccctat gtcaccaacc aggcctacca 1141 ggagcgcacc taccagcgcc tgctcctgga gaaccccagg ttccctggca tcctggctcg 1201 cctggaggag tctcctgtgt gccagcgtct gccccttacc tccttcctta tcctgccctt 1261 ccagaggatc acccgcctca agatgttggt ggagaacatc ttgaagcgga cagcacaggg 1321 ctctgaagac gaagacatgg ccaccaaggc cttcaatgcg ctcaaggagc tggtgcagga 1381 gtgcaatgct agtgtacagt ccatgaagag gacagaggaa ctcatccacc tgagcaagaa 1441 gatccacttt gagggcaaga ttttcccgct gatctctcag gcccgctggc tggttcggca 1501 tggagagttg gtagagctgg caccactgcc tgcagcaccc cctgccaagc tgaagctgtc 1561 cagcaaggca gtctacctcc acctcttcaa tgactgcttg ctgctctctc ggcggaagga 1621 gctagggaag tttgccgttt tcgtccatgc caagatggct gagctgcagg tgcgggacct 1681 gagcctgaag ctgcagggca tccccggcca cgtgttcctc ctccagctcc tccacgggca 1741 gcacatgaag caccagttcc tgctgcgggc ccggacggaa agtgagaagc agcgatggat 1801 ctcagccttg tgcccctcca gcccccagga ggacaaggag gtcatcagtg agggggaaga 1861 ttgcccccag gttcagtgtg ttaggacata caaggcactg cacccagatg agctgacctt 1921 ggagaagact gacatcctgt cagtgaggac ctggaccagt gacggctggc tggaaggggt 1981 ccgcctggca gatggtgaga aggggtgggt gccccaggcc tatgtggaag agatcagcag 2041 cctcagcgcc cgcctccgaa acctccggga gaataagcga gtcacaagtg ccaccagcaa 2101 actgggggag gctcctgtgt gatgggcagc catggcctag gaccccacct ccatgcctgg 2161 ctcctggatg gtcctggagg ggcctgcagt gtctccattc cccaagctgc tcctgctggc 2221 acttcgcttc tgtggccttg gcattgaggg cacaggctgg acacaggaat gggggcgcct 2281 ccagagggtc tctccgtcct catgctcctc agtgtccaca cttcaaggcc aaggatagtt 2341 tcttcctctg acatggggac cataacaggt gatcactgat acctggcaaa gactggggcc 2401 ctctcctttc tatgtcctca atcctgcctg actcttggtc cttctggcag ggacctggct 2461 ggggaacgtt ctggtgctga tggtgctggg acctatatgt atatttatat atatctgggg 2521 tcttgtctac cacctcccct ggtcagagcc tgagtgggtg ctggttgctg tgtcttgtct 2581 gtaaataaac tcctatcatg cctttgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2641 aaaaaaaa //