LOCUS       BC012982                2648 bp    mRNA    linear   HUM 25-MAR-2004
DEFINITION  Homo sapiens Rho guanine nucleotide exchange factor (GEF) 19, mRNA
            (cDNA clone IMAGE:3622495), partial cds.
ACCESSION   BC012982
VERSION     BC012982.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2648)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2648)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Dec 9, 2003 this sequence version replaced BC012982.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 24 Row: g Column: 17.
FEATURES             Location/Qualifiers
     source          1..2648
                     /db_xref="H-InvDB:HIT000087978"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3622495"
                     /tissue_type="Pancreas, adenocarcinoma"
                     /clone_lib="NIH_MGC_39"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..2648
                     /gene="ARHGEF19"
                     /gene_synonym="FLJ33962"
                     /db_xref="GeneID:128272"
     CDS             <1..2122
                     /gene="ARHGEF19"
                     /gene_synonym="FLJ33962"
                     /codon_start=2
                     /product="ARHGEF19 protein"
                     /protein_id="AAH12982.1"
                     /db_xref="GeneID:128272"
                     /translation="SRAGSWPHCPGAQPPALEGPWSPRHTQPQRRASHGSEKKSAWRK
                     MRVYQREEVPGCPEAHAVFLEPGQVVQEQALSTEEPRVELSGSTRVSLEGPERRRFSA
                     SELMTRLHSSLRLGRNSAARALISGSGTGAAREGKASGMEARSVEMSGDRVSRPAPGD
                     SREGDWSEPRLDTQEEPPLGSRSTNERRQSRFLLNSVLYQEYSDVASARELRRQQREE
                     EGPGDEAEGAEEGPGPPRANLSPSSSFRAQRSARGSTFSLWQDIPDVRGSGVLATLSL
                     RDCKLQEAKFELITSEASYIHSLSVAVGHFLGSAELSECLGAQDKQWLFSKLPEVKST
                     SERFLQDLEQRLEADVLRFSVCDVVLDHCPAFRRVYLPYVTNQAYQERTYQRLLLENP
                     RFPGILARLEESPVCQRLPLTSFLILPFQRITRLKMLVENILKRTAQGSEDEDMATKA
                     FNALKELVQECNASVQSMKRTEELIHLSKKIHFEGKIFPLISQARWLVRHGELVELAP
                     LPAAPPAKLKLSSKAVYLHLFNDCLLLSRRKELGKFAVFVHAKMAELQVRDLSLKLQG
                     IPGHVFLLQLLHGQHMKHQFLLRARTESEKQRWISALCPSSPQEDKEVISEGEDCPQV
                     QCVRTYKALHPDELTLEKTDILSVRTWTSDGWLEGVRLADGEKGWVPQAYVEEISSLS
                     ARLRNLRENKRVTSATSKLGEAPV"
     misc_feature    857..1390
                     /gene="ARHGEF19"
                     /gene_synonym="FLJ33962"
                     /note="RhoGEF; Region: Guanine nucleotide exchange factor
                     for Rho/Rac/Cdc42-like GTPases"
                     /db_xref="CDD:smart00325"
     misc_feature    1571..1813
                     /gene="ARHGEF19"
                     /gene_synonym="FLJ33962"
                     /note="PH; Region: PH domain. PH stands for pleckstrin
                     homology"
                     /db_xref="CDD:pfam00169"
     misc_feature    1859..2035
                     /gene="ARHGEF19"
                     /gene_synonym="FLJ33962"
                     /note="SH3; Region: Src homology 3 domains"
                     /db_xref="CDD:smart00326"
BASE COUNT          540 a          795 c          824 g          489 t
ORIGIN      
        1 cagcagggct ggcagctggc cacactgtcc tggtgcccag cccccagctc tggagggacc
       61 ctggagtccc cgacacacac agccacagcg ccgggccagc cacggctcgg agaagaagtc
      121 tgcctggcgc aagatgcggg tgtaccagcg tgaagaggtc cccggctgcc ccgaggccca
      181 cgctgtcttc ctagagcctg gccaggtagt gcaagagcag gccctgagca cagaggagcc
      241 cagggtggag ttgtctgggt ccacccgagt gagcctcgaa ggtcctgagc ggaggcgctt
      301 ctcggcatcg gagctgatga cccggctgca ctcttctctg cgcctggggc ggaattcagc
      361 agcccgggca ctcatctctg ggtcaggcac cggagcagcc cgggaaggga aagcatctgg
      421 aatggaggct cgaagtgtag agatgagcgg ggaccgggtg tcgcggccag cccctggtga
      481 ctcacgagag ggcgattggt ccgagcccag gctagacaca caggaagagc cgcctttggg
      541 gtccaggagc accaacgagc ggcgccagtc tcgattcctc cttaactccg tcctctatca
      601 ggaatacagc gacgtggcca gcgcccgcga actgcggcgg cagcagcgcg aggaggaggg
      661 cccgggggac gaggccgagg gcgcagagga ggggccgggg ccgccgcggg ccaacctctc
      721 ccccagcagc tccttccggg cgcagcgctc ggcgcgaggc tccaccttct cgctgtggca
      781 ggatatcccc gacgtacgcg gcagcggcgt cctggccacg ctgagcctgc gggactgcaa
      841 gctgcaggag gccaagtttg agctgatcac ctccgaggcc tcctacatcc acagcctgtc
      901 ggtggctgtg ggccacttct taggctctgc cgagctgagc gagtgtctgg gggcgcagga
      961 caagcagtgg ctgttttcca aactgcccga ggtcaagagc accagcgaga ggttcctgca
     1021 ggacctggag cagcggctgg aggcagatgt gctgcgcttc agcgtgtgcg acgtggtgct
     1081 ggaccactgc ccggccttcc gcagagtcta cctgccctat gtcaccaacc aggcctacca
     1141 ggagcgcacc taccagcgcc tgctcctgga gaaccccagg ttccctggca tcctggctcg
     1201 cctggaggag tctcctgtgt gccagcgtct gccccttacc tccttcctta tcctgccctt
     1261 ccagaggatc acccgcctca agatgttggt ggagaacatc ttgaagcgga cagcacaggg
     1321 ctctgaagac gaagacatgg ccaccaaggc cttcaatgcg ctcaaggagc tggtgcagga
     1381 gtgcaatgct agtgtacagt ccatgaagag gacagaggaa ctcatccacc tgagcaagaa
     1441 gatccacttt gagggcaaga ttttcccgct gatctctcag gcccgctggc tggttcggca
     1501 tggagagttg gtagagctgg caccactgcc tgcagcaccc cctgccaagc tgaagctgtc
     1561 cagcaaggca gtctacctcc acctcttcaa tgactgcttg ctgctctctc ggcggaagga
     1621 gctagggaag tttgccgttt tcgtccatgc caagatggct gagctgcagg tgcgggacct
     1681 gagcctgaag ctgcagggca tccccggcca cgtgttcctc ctccagctcc tccacgggca
     1741 gcacatgaag caccagttcc tgctgcgggc ccggacggaa agtgagaagc agcgatggat
     1801 ctcagccttg tgcccctcca gcccccagga ggacaaggag gtcatcagtg agggggaaga
     1861 ttgcccccag gttcagtgtg ttaggacata caaggcactg cacccagatg agctgacctt
     1921 ggagaagact gacatcctgt cagtgaggac ctggaccagt gacggctggc tggaaggggt
     1981 ccgcctggca gatggtgaga aggggtgggt gccccaggcc tatgtggaag agatcagcag
     2041 cctcagcgcc cgcctccgaa acctccggga gaataagcga gtcacaagtg ccaccagcaa
     2101 actgggggag gctcctgtgt gatgggcagc catggcctag gaccccacct ccatgcctgg
     2161 ctcctggatg gtcctggagg ggcctgcagt gtctccattc cccaagctgc tcctgctggc
     2221 acttcgcttc tgtggccttg gcattgaggg cacaggctgg acacaggaat gggggcgcct
     2281 ccagagggtc tctccgtcct catgctcctc agtgtccaca cttcaaggcc aaggatagtt
     2341 tcttcctctg acatggggac cataacaggt gatcactgat acctggcaaa gactggggcc
     2401 ctctcctttc tatgtcctca atcctgcctg actcttggtc cttctggcag ggacctggct
     2461 ggggaacgtt ctggtgctga tggtgctggg acctatatgt atatttatat atatctgggg
     2521 tcttgtctac cacctcccct ggtcagagcc tgagtgggtg ctggttgctg tgtcttgtct
     2581 gtaaataaac tcctatcatg cctttgaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2641 aaaaaaaa
//