LOCUS BC012933 2292 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens suppressor of variegation 4-20 homolog 1 (Drosophila),
mRNA (cDNA clone IMAGE:4707576), partial cds.
ACCESSION BC012933
VERSION BC012933.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2292)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2292)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: l Column: 13.
FEATURES Location/Qualifiers
source 1..2292
/db_xref="H-InvDB:HIT000036044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4707576"
/tissue_type="Breast, mammary adenocarcinoma."
/clone_lib="NIH_MGC_87"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2292
/gene="SUV420H1"
/gene_synonym="CGI-85"
/gene_synonym="CGI85"
/gene_synonym="KMT5B"
/db_xref="GeneID:51111"
/db_xref="HGNC:HGNC:24283"
/db_xref="MIM:610881"
CDS <1..1697
/gene="SUV420H1"
/gene_synonym="CGI-85"
/gene_synonym="CGI85"
/gene_synonym="KMT5B"
/codon_start=3
/product="SUV420H1 protein"
/protein_id="AAH12933.2"
/db_xref="GeneID:51111"
/db_xref="HGNC:HGNC:24283"
/db_xref="MIM:610881"
/translation="YTCERRGTGAFKSRVGLPAPAPVINSKYGLRETDKRLNRLKKLG
DSSKNSDSQSVSSNTDADTTQEKNNATSNRKSSVGVKKNSKSRTLTRQSMSRIPASSN
STSSKLTHINNSRVPKKLKKPAKPLLSKIKLRNHCKRLEQKNASRKLEMGNLVLKEPK
VVLYKNLPIKKDKEPEGPAQAAVASGCLTRHAAREHRQNPVRGAHSQGESSPCTYITR
RSVRTRTNLKEASDIKLEPNTLNGYKSSVTEPCPDSGEQLQPAPVLQEEELAHETAQK
GEAKCHKSDTGMSKKKSRQGKLVKQFAKIEESTPVHDSPGKDDAVPDLMGPHSDQGEH
SGTVGVPVSYTDCAPSPVGCSVVTSDSFKTKDSFRTAKSKKKRRITRYDAQLILENNS
GIPKLTLRRRHDSSSKTNDQENDGMNSSKISIKLSKDHDNDNNLYVAKLNNGFNSGSG
SSSTKLKIQLKRDEENRGSYTEGLHENGVCCSDPLSLLESRMEVDDYSQYEEESTDDS
SSSEGDEEEDDYDDDFEDDFIPLPPAKRLRLIVGKDSIDIDISSRRREDQSLRLNA"
BASE COUNT 765 a 444 c 506 g 577 t
ORIGIN
1 gttacacttg cgaaagacgg ggcactggtg cttttaaatc cagagtggga ctgcctgcgc
61 ctgctcctgt tatcaatagc aaatatggac tcagagaaac agataaacgt ttaaataggc
121 ttaaaaagtt aggtgacagc agcaaaaatt cagacagtca atctgtcagc tctaacactg
181 atgcagatac cactcaggaa aaaaacaatg caacttctaa ccgaaaatct tcagttggcg
241 taaaaaagaa tagcaagagc agaacgttaa cgaggcaatc tatgtcaaga attccagctt
301 cttccaactc tacctcatct aagctaactc atataaataa ttccagggta ccaaagaaac
361 tgaagaagcc tgcaaagcct ttactttcaa agataaaatt gagaaatcat tgcaagcggc
421 tggagcaaaa gaatgcttca agaaaactcg aaatgggaaa cttagtactg aaagagccta
481 aagtagttct gtataaaaat ttgcccatta aaaaagataa ggagccagag ggaccagccc
541 aagccgcagt tgccagcggg tgcttgacta gacacgcggc gagagaacac agacagaatc
601 ctgtgagagg tgctcattcg cagggggaga gctcgccctg cacctacata actcggcggt
661 cagtgaggac aagaacaaat ctgaaggagg cctctgacat caagcttgaa ccaaatacgt
721 tgaatggcta taaaagcagt gtgacggaac cttgccccga cagtggtgaa cagctgcagc
781 cagctcctgt gctgcaggag gaagaactgg ctcatgagac tgcacaaaaa ggggaggcaa
841 agtgtcataa gagtgacaca ggcatgtcca aaaagaagtc acgacaagga aaacttgtga
901 aacagtttgc aaaaatagag gaatctactc cagtgcacga ttctcctgga aaagacgacg
961 cggtaccaga tttgatgggt ccccattctg accagggtga gcacagtggc actgtgggcg
1021 tgcctgtgag ctacacagac tgtgctcctt cacccgtcgg ttgttcagtt gtgacatcag
1081 atagcttcaa aacaaaagac agctttagaa ctgcaaaaag taaaaagaag aggcgaatca
1141 caaggtatga tgcacagtta atcctagaaa ataactctgg gattcccaaa ttgactcttc
1201 gtaggcgtca tgatagcagc agcaaaacaa atgaccaaga gaatgatgga atgaactctt
1261 ccaaaataag catcaagtta agcaaagacc atgacaacga taacaatctc tatgtagcaa
1321 agcttaataa tggatttaac tcaggatcag gcagtagttc tacaaaatta aaaatccagc
1381 taaaacgaga tgaggaaaat agggggtctt atacagaggg gcttcatgaa aatggggtgt
1441 gctgcagtga tcctctttct ctcttggagt ctcgaatgga ggtggatgac tatagtcagt
1501 atgaggaaga aagtacagat gattcctcct cttctgaggg cgatgaagag gaggatgact
1561 atgatgatga ctttgaagac gattttattc ctcttcctcc agctaagcgc ttgaggttaa
1621 tagttggaaa agactctata gatattgaca tttcttcaag gagaagagaa gatcagtctt
1681 taaggcttaa tgcctaagct cttggtctta acttgacctg ggataactac tttaaagaaa
1741 taaaaaattc cagtcaatta ttcctcaact gaaagtttag tggcagcact tctattgtcc
1801 cttcacttat cagcatacta ttgtagaaag tgtacagcat actgactcaa ttcttaagtc
1861 tgatttgtgc aaatttttat cgtacttttt aaatagcctt cttacgtgca attctgagtt
1921 agaggtaaag ccctgttgta aaataaaggc tcaagcaaaa ttgtacagtg atagcaactt
1981 tccacacagg acgttgaaaa cagtaatgtg gctacacagt ttttttaact gtaagagcat
2041 cagctggctc tttaatatat gactaaacaa taatttaaaa caaatcatag tagcagcata
2101 ttaagggttt ctagtatgct aatatcacca gcaatgatct ttggcttttt gatttatttg
2161 ctagatgttt cccccttgga gttttgtcag tttcacactg tttgctggcc caggtgtact
2221 gtttgtggcc tttgttaata tcgcaaacca ttggttggga gtcagattgg tttcttaaaa
2281 aaaaaaaaaa aa
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