LOCUS BC012915 1931 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens OMA1 homolog, zinc metallopeptidase (S. cerevisiae),
mRNA (cDNA clone MGC:21387 IMAGE:4471592), complete cds.
ACCESSION BC012915
VERSION BC012915.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1931)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1931)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851455.
FEATURES Location/Qualifiers
source 1..1931
/db_xref="H-InvDB:HIT000036032"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21387 IMAGE:4471592"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1931
/gene="OMA1"
/gene_synonym="2010001O09Rik"
/gene_synonym="DAB1"
/gene_synonym="FLJ33782"
/gene_synonym="MPRP-1"
/gene_synonym="YKR087C"
/gene_synonym="ZMPOMA1"
/db_xref="GeneID:115209"
/db_xref="HGNC:HGNC:29661"
CDS 95..1669
/gene="OMA1"
/gene_synonym="2010001O09Rik"
/gene_synonym="DAB1"
/gene_synonym="FLJ33782"
/gene_synonym="MPRP-1"
/gene_synonym="YKR087C"
/gene_synonym="ZMPOMA1"
/codon_start=1
/product="OMA1 homolog, zinc metallopeptidase (S.
cerevisiae)"
/protein_id="AAH12915.1"
/db_xref="GeneID:115209"
/db_xref="HGNC:HGNC:29661"
/translation="MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVN
HIVNKYQGLGVNQCDRWSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWND
AFSRQLLIKEVTAVPSLSVLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKL
FAIIVGRGIRKWWQALPPNKKEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSP
ITGRSKLLLLGKEQFRLLSELEYEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKD
VPGISQINWVIHVVDSPIINAFVLPNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVL
GHAAEKAGMVHLLDFLGMIFLTMIWAICPRDSLALLCQWIQSKLQEYMFNRPYSRKLE
AEADKIGLLLAAKACADIRASSVFWQQMEFVDSLHGQPKMPEWLSTHPSHGNRVEYLD
RLIPQALKIREMCNCPPLSNPDPRLLFKLSTKHFLEESEKEDLNITKKQKMDTLPIQK
QEQIPLTYIVEKRTGS"
BASE COUNT 618 a 336 c 403 g 574 t
ORIGIN
1 gtatggcggg caggaagtgc gagtgcgcgc ctgcgcatag gtcgggtcgg cggtgtcacc
61 gctttcgctt ctgcttgagt aatcaagtga aaaaatgagc ttcatctgtg gattgcagtc
121 tgctgctaga aaccatgttt tcttccgatt taattcactg tctaactgga gaaaatgtaa
181 cacattagca tccacctcac ggggctgtca tcaagtacaa gttaaccata tagtaaataa
241 gtatcaggga ctgggagtaa atcagtgtga caggtggagt tttctgcctg gaaactttca
301 tttttatagt acttttaaca acaaaagaac aggaggcctc tcaagtacca aaagtaagga
361 aatttggagg attaccagca aatgtactgt atggaatgat gctttttcaa gacagctgct
421 aataaaagaa gttacagcag tccctagtct gtcagtattg catcctctaa gccctgcttc
481 cataagagct attaggaatt tccatacttc tccacggttt caagctgctc cggttcctct
541 cttgttgatg attcttaaac cagtacagaa gttatttgca atcattgtag gcaggggcat
601 aaggaaatgg tggcaggcac ttcctcctaa caagaaggaa gtagttaaag aaaatataag
661 gaagaataaa tggaagctat tccttggttt gagtagtttt ggattgctct ttgtggtgtt
721 ttattttact cacctggaag taagtccaat cacaggaagg agcaagctac tattattggg
781 gaaagaacag ttcagacttt tatcggaact ggaatatgaa gcatggatgg aagaatttaa
841 aaatgatatg ctaactgaga aagatgcccg atacctggct gttaaagaag tgctttgtca
901 tctaattgaa tgcaataaag atgttccagg gatctctcag atcaattggg ttattcatgt
961 ggttgattcc ccaattatta atgccttcgt gcttccaaat ggacaaatgt ttgttttcac
1021 tggattttta aatagtgtaa ccgatattca tcaactttct ttccttctgg gccatgaaat
1081 agcacatgca gtacttgggc atgctgcaga aaaggctggc atggttcatt tgttggattt
1141 cctaggtatg attttcctca caatgatttg ggccatttgt cctcgagata gcttggcact
1201 tttgtgccag tggatacagt ctaaattgca ggagtatatg tttaatagac catacagcag
1261 aaaattggag gccgaagctg acaaaattgg actactgctt gctgcaaagg cttgtgcaga
1321 cataagagcc agttcagtgt tttggcagca aatggagttc gttgatagcc tgcatggcca
1381 acccaagatg ccagaatggt tatctacaca cccttctcat ggcaatcgag ttgagtactt
1441 ggatagactt atacctcagg ctctcaaaat tagagagatg tgtaattgtc caccactgtc
1501 taatccagac cctcgattac tattcaaact cagcacgaag cattttcttg aagaatcaga
1561 gaaagaagac ctaaatatca cgaagaaaca gaaaatggat actcttccta ttcaaaaaca
1621 ggagcaaata ccattaacat acatagttga gaaaagaacg ggcagttgaa ttaaaattta
1681 tgagacacaa gatatatgaa gaatgttgca gtccttatca ttttatgtta ctttttaaaa
1741 aatgatgttt gaagtgaaaa aaaaaaagga tattcagggt caaatcatgt acattacaga
1801 tattatctaa attcttctag aatttatttt tcatgaaata ttgatgtatt ttaatctatg
1861 ttaaaatatc ttcaatgagg aaaatgtcac agaataaatt tatattacac attttaaaaa
1921 aaaaaaaaaa a
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