LOCUS BC012886 1724 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RuvB-like 1 (E. coli), mRNA (cDNA clone MGC:21500
IMAGE:3876400), complete cds.
ACCESSION BC012886
VERSION BC012886.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1724)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1724)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1724
/db_xref="H-InvDB:HIT000036014"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21500 IMAGE:3876400"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1724
/gene="RUVBL1"
/gene_synonym="ECP54"
/gene_synonym="NMP238"
/gene_synonym="RVB1"
/gene_synonym="TIP49"
/gene_synonym="TIP49A"
/db_xref="GeneID:8607"
/db_xref="HGNC:HGNC:10474"
/db_xref="MIM:603449"
CDS 34..1404
/gene="RUVBL1"
/gene_synonym="ECP54"
/gene_synonym="NMP238"
/gene_synonym="RVB1"
/gene_synonym="TIP49"
/gene_synonym="TIP49A"
/codon_start=1
/product="RuvB-like 1 (E. coli)"
/protein_id="AAH12886.1"
/db_xref="GeneID:8607"
/db_xref="HGNC:HGNC:10474"
/db_xref="MIM:603449"
/translation="MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQEN
AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVY
STEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIG
LKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAE
EYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLR
GEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRG
NCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALN
HLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ
QDKYMK"
BASE COUNT 487 a 391 c 468 g 378 t
ORIGIN
1 tccacgctgg ttttagctcc cggcgtctgc aaaatgaaga ttgaggaggt gaagagcact
61 acgaagacgc agcgcatcgc ctcccacagc cacgtgaaag ggctggggct ggacgagagc
121 ggcttggcca agcaggcggc ctcagggctt gtgggccagg agaacgcgcg agaggcatgt
181 ggcgtcatag tagaattaat caaaagcaag aaaatggctg gaagagctgt cttgttggca
241 ggacctcctg gaactggcaa gacagctctg gctctggcta ttgctcagga gctgggtagt
301 aaggtcccct tctgcccaat ggtggggagt gaagtttact caactgagat caagaagaca
361 gaggtgctga tggagaactt ccgcagggcc attgggctgc gaataaagga gaccaaggaa
421 gtttatgaag gtgaagtcac agagctaact ccgtgtgaga cagagaatcc catgggagga
481 tatggcaaaa ccattagcca tgtgatcata ggactcaaaa cagccaaagg aaccaaacag
541 ttgaaactgg accccagcat ttttgaaagt ttgcagaaag agcgagtaga agctggagat
601 gtgatttaca ttgaagccaa cagtggggcc gtgaagaggc agggcaggtg tgatacctat
661 gccacagaat tcgaccttga agctgaagag tatgtcccct tgccaaaagg ggatgtgcac
721 aaaaagaaag aaatcatcca agatgtgacc ttgcatgact tggatgtggc taatgcgcgg
781 ccccaggggg gacaagatat cctgtccatg atgggccagc taatgaagcc aaagaagaca
841 gaaatcacag acaaacttcg aggggagatt aataaggtgg tgaacaagta catcgaccag
901 ggcattgctg agctggtccc gggtgtgctg tttgttgatg aggtccacat gctggacatt
961 gagtgcttca cctacctgca ccgcgccctg gagtcttcta tcgctcccat cgtcatcttt
1021 gcatccaacc gaggcaactg tgtcatcaga ggcactgagg acatcacatc ccctcacggc
1081 atccctcttg accttctgga ccgagtgatg ataatccgga ccatgctgta tactccacag
1141 gaaatgaaac agatcattaa aatccgtgcc cagacggaag gaatcaacat cagtgaggag
1201 gcactgaacc acctggggga gattggcacc aagaccacac tgaggtactc agtgcagctg
1261 ctgaccccgg ccaacttgct tgctaaaatc aacgggaagg acagcattga gaaagagcat
1321 gtcgaagaga tcagtgaact tttctatgat gccaagtcct ccgccaaaat cctggctgac
1381 cagcaggata agtacatgaa gtgagatggc tgaggttttc agcagtaaga gactccccag
1441 gtgtgcctgg cctgggtcca gcctgtgggc gcttgcccct gggcttgggg ctgccgtccc
1501 cactcaggcg tggtctgcag cgctgtcagt tcagtgtgga aagcatttct ttttaagtta
1561 tcgtaactgt tcctgtggtt gctttgaaag aacccttcct tacctggtgt gttttctata
1621 aatcttcata ggttattttg attctctctc tctctctctc taagtttttt aaaaataaac
1681 ttttcagaac agttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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