LOCUS BC012866 1723 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member
10a, mRNA (cDNA clone MGC:9365 IMAGE:3857315), complete cds.
ACCESSION BC012866
VERSION BC012866.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1723)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1723)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361085.
FEATURES Location/Qualifiers
source 1..1723
/db_xref="H-InvDB:HIT000036006"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9365 IMAGE:3857315"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1723
/gene="TNFRSF10A"
/gene_synonym="APO2"
/gene_synonym="CD261"
/gene_synonym="DR4"
/gene_synonym="MGC9365"
/gene_synonym="TRAILR-1"
/gene_synonym="TRAILR1"
/db_xref="GeneID:8797"
/db_xref="HGNC:HGNC:11904"
/db_xref="MIM:603611"
CDS 66..1472
/gene="TNFRSF10A"
/gene_synonym="APO2"
/gene_synonym="CD261"
/gene_synonym="DR4"
/gene_synonym="MGC9365"
/gene_synonym="TRAILR-1"
/gene_synonym="TRAILR1"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 10a"
/protein_id="AAH12866.1"
/db_xref="GeneID:8797"
/db_xref="HGNC:HGNC:11904"
/db_xref="MIM:603611"
/translation="MAPPPARVHLGAFLAVTPNPGSAASGTEAAAATPSKVWGSSAGR
IEPRGGGRGALPTSMGQHGPSARARAGRAPGPRPAREASPRLRVHKTFKFVVVGVLLQ
VVPSSAATIKLHDQSIGTQQWEHSPLGELCPPGSHRSEHPGACNRCTEGVGYTNASNN
LFACLPCTACKSDEEERSPCTTTRNTACQCKPGTFRNDNSAEMCRKCSRGCPRGMVKV
KDCTPWSDIECVHKESGNGHNIWVILVVTLVVPLLLVAVLIVCCCIGSGCGGDPKCMD
RVCFWRLGLLRGPGAEDNAHNEILSNADSLSTFVSEQQMESQEPADLTGVTVQSPGEA
QCLLGPAEAEGSQRRRLLVPANGADPTETLMLFFDKFANIVPFDSWDQLMRQLDLTKN
EIDVVRAGTAGPGDALYAMLMKWVNKTGRNASIHTLLDALERMEERHAKEKIQDLLVD
SGKFIYLEDGTGSAVSLE"
BASE COUNT 426 a 413 c 502 g 382 t
ORIGIN
1 actccgaatg cgaagttctg tcttgtcata gccaagcacg ctgcttcttg gattgacctg
61 gcaggatggc gccaccacca gctagagtac atctaggtgc gttcctggca gtgactccga
121 atcccgggag cgcagcgagt gggacagagg cagccgcggc cacacccagc aaagtgtggg
181 gctcttccgc ggggaggatt gaaccacgag gcgggggccg aggagcgctc cctacctcca
241 tgggacagca cggacccagt gcccgggccc gggcagggcg cgccccagga cccaggccgg
301 cgcgggaagc cagccctcgg ctccgggtcc acaagacctt caagtttgtc gtcgtcgggg
361 tcctgctgca ggtcgtacct agctcagctg caaccatcaa acttcatgat caatcaattg
421 gcacacagca atgggaacat agccctttgg gagagttgtg tccaccagga tctcatagat
481 cagaacatcc tggagcctgt aaccggtgca cagagggtgt gggttacacc aatgcttcca
541 acaatttgtt tgcttgcctc ccatgtacag cttgtaaatc agatgaagaa gagagaagtc
601 cctgcaccac gaccaggaac acagcatgtc agtgcaaacc aggaactttc cggaatgaca
661 attctgctga gatgtgccgg aagtgcagca gagggtgccc cagagggatg gtcaaggtca
721 aggattgtac gccctggagt gacatcgagt gtgtccacaa agaatcaggc aatggacata
781 atatatgggt gattttggtt gtgactttgg ttgttccgtt gctgttggtg gctgtgctga
841 ttgtctgttg ttgcatcggc tcaggttgtg gaggggaccc caagtgcatg gacagggtgt
901 gtttctggcg cttgggtctc ctacgagggc ctggggctga ggacaatgct cacaacgaga
961 ttctgagcaa cgcagactcg ctgtccactt tcgtctctga gcagcaaatg gaaagccagg
1021 agccggcaga tttgacaggt gtcactgtac agtccccagg ggaggcacag tgtctgctgg
1081 gaccggcaga agctgaaggg tctcagagga ggaggctgct ggttccagca aatggtgctg
1141 accccactga gactctgatg ctgttctttg acaagtttgc aaacatcgtg ccctttgact
1201 cctgggacca gctcatgagg cagctggacc tcacgaaaaa tgagatcgat gtggtcagag
1261 ctggtacagc aggcccaggg gatgccttgt atgcaatgct gatgaaatgg gtcaacaaaa
1321 ctggacggaa cgcctcgatc cacaccctgc tggatgcctt ggagaggatg gaagagagac
1381 atgcaaaaga gaagattcag gacctcttgg tggactctgg aaagttcatc tacttagaag
1441 atggcacagg ctctgccgtg tccttggagt gaaagactct ttttaccaga ggtttcctct
1501 taggtgttag gagttaatac atattaggtt tttttttttt ttaacatgta tacaaagtaa
1561 attcttagcc aggtgtagtg gctcatgcct gtaatcccag cactttggga ggctgaggcg
1621 ggtggatcac ttgaggtcag aagttcaaga ccagcctgac caacatcgtg aaatgccgtc
1681 tttacaaaaa aatacaaaaa ttaactggaa aaaaaaaaaa aaa
//