LOCUS BC012767 1927 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens sorting nexin 15, mRNA (cDNA clone MGC:16239 IMAGE:3678551), complete cds. ACCESSION BC012767 VERSION BC012767.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1927) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1927) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC012767.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 24 Row: i Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46370087. FEATURES Location/Qualifiers source 1..1927 /db_xref="H-InvDB:HIT000035938" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16239 IMAGE:3678551" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1927 /gene="SNX15" /gene_synonym="HSAF001435" /db_xref="GeneID:29907" /db_xref="HGNC:HGNC:14978" /db_xref="MIM:605964" CDS 101..1129 /gene="SNX15" /gene_synonym="HSAF001435" /codon_start=1 /product="sorting nexin 15" /protein_id="AAH12767.1" /db_xref="GeneID:29907" /db_xref="HGNC:HGNC:14978" /db_xref="MIM:605964" /translation="MSRQAKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDVK EVVVWKRYSDFRKLHGDLAYTHRNLFRRLEEFPAFPRAQVFGRFEASVIEERRKGAED LLRFTVHIPALNNSPQLKEFFRGGEVTRPLEVSRDLHILPPPLIPTPPPDDPRLSQLL PAERRGLEELEVPVDPPPSSPAQEALDLLFNCESTEEASGSPARGPLTEAELALFDPF SKEEGAAPSPTHVAELATMEVESARLDQEPWEPGGQEEEEDGEGGPTPAYLSQATELI TQALRDEKAGAYAAALQGYRDGVHVLLQGVPSDPLPARQEGVKKKAAEYLKRAEEILR LHLSQLPP" BASE COUNT 429 a 577 c 529 g 392 t ORIGIN 1 cgcaggcctg gcgaggcggc ggcgggcgga ggctgggccg gaggggtggg gacggcgagg 61 aggtggaggc cggcgctccg ctccgctcca gctcggtttc atgtcccgcc aggcgaagga 121 tgacttcctg cggcactaca cagtgtcgga ccccaggact caccccaagg gctacaccga 181 gtacaaagta accgcgcagt tcatctcaaa gaaggaccca gaggatgtca aagaggtggt 241 ggtctggaag cggtacagcg acttccgcaa gctgcatgga gacctggcct acacccaccg 301 caacctcttc cgccgcctcg aggagttccc tgctttcccc cgggcccagg tgtttggccg 361 gtttgaagcc tcagtgatcg aggagcggcg aaagggggca gaggacctgc ttcgcttcac 421 tgtgcacata cctgcgctca acaacagccc ccagctcaag gagttcttcc ggggtgggga 481 ggtgacccga cccttggagg tgtccaggga cctacacatc ctgccacccc ctctgatccc 541 caccccgccc cctgatgacc cccggctatc ccaactgctc cctgcagaaa ggaggggcct 601 cgaggaattg gaggtgccag tggacccccc accatccagc cctgcccagg aggccctgga 661 tctcctcttt aactgtgaga gcaccgagga ggcatctggt tcccctgccc gaggccccct 721 caccgaggct gagcttgccc tcttcgaccc cttctccaag gaagaaggcg cagcccccag 781 ccccacccat gtggctgagc tggcaacgat ggaggtggag tctgcaaggc tggaccagga 841 accctgggag ccaggagggc aggaggagga agaggatggg gaaggagggc ccacccctgc 901 ctacctaagc caggccacag agctcatcac ccaggccctg cgggatgaga aggcaggcgc 961 ttacgctgct gcactccagg gctatcgaga cggcgtgcac gtcttgcttc agggagtccc 1021 cagtgacccg ttgcctgccc gccaggaagg tgtgaagaag aaggcagctg agtacctgaa 1081 gcgggcagag gagatcctgc gcctgcacct gtctcaactc ccaccctaac agggagtggg 1141 ccattccctg ggactctcgc tcctgcactg ccagcccctt ctcctctccc cagggcctgg 1201 ccctacctcc tggtcttgta attacaggag ccatttctgt aggtaactgg accaagaatg 1261 agaaaaataa tgaattctta gctccctgat tacacctgcc accttggaat ccaggactca 1321 cacttctgac cctgcctgtc tttttggggt ttttttgagt tggagtctcg ctgtgtcgcc 1381 cagactggag tgcagtggtg ggatcgcggc tcactgcaac ctccacctcc caggttcaag 1441 cagttctcct gtctcagcct ccccagtagc tgagattgca ggcacatgcc accacgccca 1501 gctaatattt tgtattttca gtagggacgg ggttacacca tgttggccag gctggtctcg 1561 aactcctgac ctcaagtgat ccacccgcct cagtctccca aagtgctgag attacaggca 1621 tgagtcacta cgcccggccc atgtctgtct gtcttgatgt gtgagcagca gctgtggtca 1681 ttaaaccatt agtttacccc tctagaactg gggtctgcaa actcccacct gcagccaaat 1741 ctggcccacc tcctttttaa tgtaagggct gtgagagtgg tttttacttt ttttaatgat 1801 taaaaaaatc aaaataatat tctgtgacaa tgacaggtga aatttatatg tgacaagtga 1861 aaattatatg aaatttaaga gtccataaat aaaatttgtt ggaacacaaa aaaaaaaaaa 1921 aaaaaaa //