LOCUS BC012746 2959 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens mesoderm development candidate 2, mRNA (cDNA clone
MGC:15398 IMAGE:3954629), complete cds.
ACCESSION BC012746
VERSION BC012746.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2959)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC012746.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..2959
/db_xref="H-InvDB:HIT000035929"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15398 IMAGE:3954629"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2959
/gene="MESDC2"
/gene_synonym="BOCA"
/gene_synonym="KIAA0081"
/gene_synonym="MESD"
/db_xref="GeneID:23184"
/db_xref="MIM:607783"
CDS 38..742
/gene="MESDC2"
/gene_synonym="BOCA"
/gene_synonym="KIAA0081"
/gene_synonym="MESD"
/codon_start=1
/product="MESDC2 protein"
/protein_id="AAH12746.1"
/db_xref="GeneID:23184"
/db_xref="MIM:607783"
/translation="MAASRWARKAVVLLCASDLLLLLLLLPPPGSCAAEGSPGTPDES
TPPPRKKKKDIRDYNDADMARLLEQWEKDDDIEEGDLPEHKRPSAPVDFSKIDPSKPE
SILKMTKKGKTLMMFVTVSGSPTEKETEEITSLWQGSLFNANYDVQRFIVGSDRAIFM
LRDGSYAWEIKDFLVGQDRCADVTLEGQVYPGKGGGSKEKNKTKQDKGKKKKEGDLKS
RSSKEENRAGNKREDL"
BASE COUNT 764 a 725 c 758 g 712 t
ORIGIN
1 ggtaagcgcg tctagggcgc tgcgcggcgc agcgaaaatg gcggcttcca ggtgggcgcg
61 caaggccgtg gtcctgcttt gtgcctctga cctgctgctg ctgctgctac tgctaccacc
121 gcctgggtcc tgcgcggccg aaggctcgcc cgggacgccc gacgagtcta ccccacctcc
181 ccggaagaag aagaaggata ttcgcgatta caatgatgca gacatggcgc gtcttctgga
241 gcaatgggag aaagatgatg acattgaaga aggagatctt ccagagcaca agagaccttc
301 agcacctgtc gacttctcaa agatagaccc aagcaagcct gaaagcatat tgaaaatgac
361 gaaaaaaggg aagactctca tgatgtttgt cactgtatca ggaagcccta ctgagaagga
421 gacagaggaa attacgagcc tctggcaggg cagccttttc aatgccaact atgacgtcca
481 gaggttcatt gtgggatcag accgtgctat cttcatgctt cgcgatggga gctacgcctg
541 ggagatcaag gactttttgg tcggtcaaga caggtgtgct gatgtaactc tggagggcca
601 ggtgtacccc ggcaaaggag gaggaagcaa agagaaaaat aaaacaaagc aagacaaggg
661 caaaaaaaag aaggaaggag atctgaaatc tcggtcttcc aaggaagaaa atcgagctgg
721 gaataaaaga gaagacctgt gatggggcag cagtgacgcg ctgtgggggg acaggtggac
781 gtggagagct ctttgcccag ctcctggggt gggagtggtc tcaggcaact gcacaccgga
841 tgacattcta gtgtcttcta gaaagggtct gccacatgac cagtttgtgg tcaaagaatt
901 actgcttaat aggcttcaag taagaagaca gatgttttct aattaatact ggacactgac
961 aaattcatgt ttactataaa atctccttac atggaaatgt gactgtgttg ctttttccca
1021 tttacacttg acccctgagc cccttccagt gctgcctgag gtgccctcta cctgtgcctg
1081 cctctcgtct gccagtttga tttggacctg tttttcccac ctcagccccc atgctcttgt
1141 caaacgtgtt tggcctccag ccaaacaggg cctgggagga aaagagagtc ctgcttctgc
1201 ctggcttccc catcggggag gggagttgaa gtgacagcct cctgacagct tagaaatgtg
1261 gaggacgcag caagttctgg acatggccag ccatatgaat gatatcttct ctttctttga
1321 accatctcca cctgctctta tggacacccc gccttggggc aaggcaaggg atgggcacaa
1381 cttggaagat tttggctttg tgatcctcag tgtccagtgt cacccagatg ggccggaagc
1441 tgcctttgaa gccaacgaat gccatttgct ctgaaaagca atgatgagtc tcctgagcaa
1501 aagccctatg agaggacggc tgccccaccc cgttccatgg ctccccatcg ccagcccccc
1561 acgcccacca ggtaccgcct agccacactg cactgtggcc ccttgggaag agctctgtgc
1621 tcagctactg atggtgcctg acatgtgttt gtatggggca ggcagggtct cacctgagcc
1681 tcactgccac ctaggcaggg tgatggcttt gttgtagaca ggggagccat gcacagcagg
1741 aaatggggca aactgtaagg gaggagacct cctaggaacc tgcctacctt cgagctgccc
1801 ctaggacaac cagcaagtcc ctgcccctct ctgaagccca gtgttcccat ccatcaaatg
1861 atggcattga tctacaagat ctccttcccc actctatcac tctgtggctc tagaaagagt
1921 tctgagaggt gaagaaatct gaccaagagt gtggagtaaa tggtgcaccc cagattagaa
1981 ctctaaaccc ctgaaaccca cacagcactc tccatcttgc agttcacagc ttgagcatcc
2041 gaggggcatg ggaatccacg tctatactca gcccatcttg gcaggcaaca tgcatttatc
2101 accaccggga aagtgccatt caacttaggt caccttacat acatcagctt ttggcaaccg
2161 ggatcttaat ttaaaagaca gaggctccaa aatgatttca ggactgggct ggaaaggata
2221 cttctctttt ccttatgtcc tcctttggct ggtttgaagg gtttgcattg cttctgattt
2281 ttctcattgc cccatatgat gggtttctga ttttgatgtt ttccatagtg aggatggtgt
2341 ataactaaga agcccagctt tgagttagga agattaggat ccaagtccta accttaagca
2401 agtggcttgg ctgttaaatt cttggtgtcc tcatcttaaa tggaaataat agtacctgct
2461 gcacaggtta ttaatgagta agtgagataa ttataacatg ttgtgcaaag tgcaaggctg
2521 aacattgaat agcaaccaca atgatcatta tcattattgc ccgtggagct tctctgccgc
2581 ccatacagcc tctctgagga ctctccctgc acctagtttt tgtgatgata atgggtgtca
2641 tgctgacatg tccctcctgg atggcttctt ccagcacagc cagcaagcct gtgctaggct
2701 tcaccaccga agctgcctgg ccttggacaa gccatgtagg ttctctgggc tttagttttc
2761 tggaacaaat aagagttttg caagctgcaa aggactgtac aaacgctagg catcagctag
2821 aatgttgaag aagatgcagg acccctggcc agtctgaata gcaggaattg ggtaggaggg
2881 tgagactaag ccacttttct tatgatactt ttgttgaata aagggccact ttccaagcaa
2941 aaaaaaaaaa aaaaaaaaa
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