LOCUS BC012745 4387 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens ribosomal RNA processing 12 homolog (S. cerevisiae),
mRNA (cDNA clone MGC:15361 IMAGE:4025242), complete cds.
ACCESSION BC012745
VERSION BC012745.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4387)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4387)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC012745.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: m Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147326.
FEATURES Location/Qualifiers
source 1..4387
/db_xref="H-InvDB:HIT000035928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15361 IMAGE:4025242"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..4387
/gene="RRP12"
/db_xref="GeneID:23223"
/db_xref="HGNC:HGNC:29100"
CDS 78..3971
/gene="RRP12"
/codon_start=1
/product="ribosomal RNA processing 12 homolog (S.
cerevisiae)"
/protein_id="AAH12745.1"
/db_xref="GeneID:23223"
/db_xref="HGNC:HGNC:29100"
/translation="MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQAARSRFFSR
PSGRSDLTVDAVKLHNELQSGSLRLGKSEAPETPMEEEAELVLTEKSSGTFLSGLSDC
TNVTFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVES
PESLAAVAYLLNLVLKRVPSPVLIKKFSDTSKAFMDIMSAQASSGSTSVLRWVLSCLA
TLLRKQDLEAWGYPVTLQVYHGLLSFTVHPKPKIRKAAQHGVCSVLKGSEFMFEKAPA
HHPAAISTAKFCIQEIEKSGGSKEATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVM
TLSHVLVTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLK
VMEKAHINLVRLQWDLGLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPH
MADIGSVTSSASGPAQSVAKMFRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPV
MRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEVVLQAVPLEIDGSEETLDFPR
SWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWT
LLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEV
SRFAKNFLPILFNLYGQPVAAGDTPAPRRAVLETIRTYLTITDTQLVNSLLEKASEKV
LDPASSDFTRLSVLDLVVALAPCADEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEV
CASPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKRPRLKCLLHIVRKLSAEHKEFIT
ALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQCYLVLIYPGLVGAV
TMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVTV
MDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVKRLLPEEYHR
VLVNIRKAEARAKRHRALSQAAVEEEEEEEEEEEPAQGKGDSIEEILADSEDEEDNEE
EERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGRKKDHSF
KVSADGRLIIREEADGNKMEEEEGAKGEDEEMADPMEDVIIRNKKHQKLKHQKEAEEE
ELEIPPQYQAGGSGIHRPVAKKAMPGAEYKAKKAKGDVKKKGRPDPYAYIPLNRSKLN
RRKKMKLQGQFKGLVKAARRGSQVGHKNRRKDRRP"
BASE COUNT 973 a 1254 c 1301 g 859 t
ORIGIN
1 cacgtgggtt ctgagcgtgt ttctacgtcc ctggaagccg gtcatttaag ctcattcctc
61 gccacggctt agtcaacatg ggtcgctcgg gaaagttgcc ctctggtgtc tcagctaagt
121 tgaagcgctg gaagaaaggc cacagcagcg acagcaaccc cgccatctgc cgccaccgtc
181 aggccgcccg cagccgcttc ttcagccggc cgtcaggaag gagtgacctg acagtcgatg
241 ctgtgaagtt acataatgag ctgcagtcag ggtccttgcg cttgggcaaa agcgaagccc
301 cggagacgcc catggaagaa gaggcggagc tggttctcac cgagaagtcc tcgggtacct
361 tcctgagtgg cctttccgac tgcacaaacg tcaccttcag caaagtacag cgcttctggg
421 agtccaactc ggctgcccac aaggagatct gtgctgttct ggctgctgtc actgaggtga
481 ttcgctccca gggagggaag gagacggaga ctgagtactt cgctgctctg atgacaacaa
541 tggaagcagt ggagtccccg gagtccctgg ccgccgttgc ttacctgctg aaccttgtcc
601 tgaagcgtgt tcccagccct gtgcttatta agaagttctc tgatacctcc aaagccttca
661 tggatatcat gtcagctcag gccagcagcg gctccacctc tgtcctccga tgggtccttt
721 cctgcctggc cacccttctg cggaagcaag acctggaggc ctggggctac cccgtgaccc
781 ttcaggtgta ccatgggctg ctgagcttca cggtgcatcc caagcccaag atccggaagg
841 ctgcccagca tggagtatgc tcagtcctca agggcagtga attcatgttt gaaaaggccc
901 ctgcccatca tcctgctgcc atttccactg ccaagttctg catccaggag attgagaagt
961 ctggaggctc caaggaggcc accaccacgc tgcacatgct gacgctgctg aaggacctgc
1021 tgccctgctt cccggaaggc ctggtgaaga gctgcagtga gactctcctc agggtcatga
1081 ccttgagcca tgtgctggtg acagcctgtg ccatgcaggc ctttcacagc ctcttccacg
1141 ccaggcctgg cctgagcacc ctgtcagcag agctcaacgc ccagatcatc acggccctgt
1201 acgactatgt tcccagtgag aatgatttac aacccctgct agcctggctt aaggtcatgg
1261 agaaagccca catcaacctg gtgaggttgc agtgggacct ggggctaggc cacctccctc
1321 gcttttttgg aactgcggtg acctgcctcc tttccccaca ctcgcaagtg ctgactgctg
1381 ctacgcagag cctcaaggag atcctgaagg aatgcgtggc tccccacatg gctgacattg
1441 gctccgtgac ctcctcggcc tcaggccctg cccaatctgt tgccaagatg ttcagggcag
1501 tggaggaggg cctgacgtac aaattccatg cggcctggag ctccgtgttg cagctgctgt
1561 gtgtcttctt cgaggcgtgt gggagacagg cccaccctgt gatgaggaag tgcctccagt
1621 ccctgtgtga cctgcgcctc tcccctcatt tcccccacac ggcggctctt gaccaggcag
1681 tgggggctgc ggtgaccagt atgggacctg aggtggtgct gcaggctgtg cctttggaaa
1741 ttgatggctc tgaggagact ctggatttcc cacggagctg gctgctgcct gtcatccgag
1801 accatgttca ggaaacgcga cttggttttt tcaccaccta cttcttgccc ctggctaaca
1861 ccctgaagag caaagccatg gacctggctc aggcaggcag cacagtggaa tctaagatct
1921 acgacacact ccagtggcag atgtggacac tcctgcctgg gttctgcaca aggcctacag
1981 atgtggccat ctccttcaaa gggctggcac ggacgctggg catggccatc agcgagcgtc
2041 cagacctgag ggtcaccgtg tgccaggccc tgcgcaccct catcaccaag ggctgccagg
2101 cagaggctga ccgtgctgaa gtgagtcgct ttgccaagaa ctttctgccg atcctcttca
2161 acctgtatgg gcagcccgtg gcagccgggg acactccagc ccctcgccgg gctgtgctgg
2221 aaaccatcag aacttacctc accatcactg acactcagtt ggtgaacagt ctcctggaaa
2281 aagccagtga gaaggtgctc gaccctgcca gctctgactt taccagattg tctgtcctgg
2341 acctggtcgt ggccttggct ccgtgtgctg acgaagctgc catcagtaag ctatactcca
2401 ccatccggcc ctacctagag agcaaggccc acggggtgca gaagaaggcc taccgagtgc
2461 tggaggaggt gtgtgccagt cctcagggcc ccggggccct cttcgtgcag agccacctgg
2521 aggacctgaa gaagacactg ctggactcgc tgcggagcac ctcctcaccc gccaagaggc
2581 cccgtttgaa gtgcctccta cacatcgtga ggaagctctc agctgaacac aaggagttca
2641 tcactgccct catcccagag gtgatcctgt gcaccaagga ggtgtcggtg ggcgcacgga
2701 agaacgcttt tgcactgctc gtggagatgg gccatgcttt cctaaggttt ggctcgaacc
2761 aggaagaggc cctgcagtgc tacctcgtcc tgatctaccc tggcctggtg ggcgcggtga
2821 ccatggtcag ctgcagcatc ctggccctga cccacctcct tttcgagttt aaaggtctga
2881 tggggaccag tacagtggag cagctgctgg agaatgtgtg cctgcttctg gcctcccgca
2941 cccgtgacgt ggtcaagtct gcactgggct tcatcaaggt ggcagtgact gtcatggacg
3001 tggcgcacct ggccaaacat gtgcagctgg tgatggaagc cattgggaag ctttcagatg
3061 acatgcggcg gcacttccgc atgaagcttc ggaacctgtt caccaagttc atccgcaagt
3121 ttggatttga gctggtgaaa aggctgttgc ccgaggagta ccacagagtc ctggtcaaca
3181 tccggaaagc tgaggcccgg gccaagaggc accgagccct gagccaggct gccgtggagg
3241 aggaagaaga ggaggaggag gaggaggagc ccgcccaggg caaaggtgac agcattgagg
3301 agattttagc tgactcagag gacgaggagg acaatgagga ggaggaaaga agccgaggca
3361 aggagcagcg gaagctggca cgacagagga gccgggcatg gctgaaagag ggcggtgggg
3421 acgagcccct caacttcctg gatcccaagg tggcccaacg agtcctggcc acgcagccag
3481 ggccaggccg gggcaggaag aaggaccaca gcttcaaggt gagcgccgat ggccggctga
3541 tcataaggga ggaggcagac ggcaacaaga tggaggaaga ggaaggtgcc aaaggcgaag
3601 atgaagagat ggctgaccca atggaagatg tgatcatcag gaataaaaag caccagaagc
3661 tcaagcacca gaaagaggct gaggaggagg agctggagat accccctcag taccaagctg
3721 gaggctctgg cattcatcgc cctgtggcca agaaggctat gcctggggct gaatacaagg
3781 ccaagaaagc aaaaggtgat gtgaagaaga aaggccggcc ggatccctat gcctacatcc
3841 ccctcaacag aagcaagctc aaccgcagga agaagatgaa gctgcaggga cagttcaaag
3901 gcctggtgaa ggctgcccgg cgaggttccc aggtgggaca caaaaaccgc agaaaggatc
3961 gtcgaccctg aggcccaggg cccctgggct gccctgtggt ccagtctgag gccctttcag
4021 cccccaggct gccttgccac cagctccagg tgctcaagat tctggcagag cctggactca
4081 ggatgacttg gaactagggc ttggctctca gaagtcctgg attttggaaa ctccaaatgg
4141 aatcaccctt cagagacatc cctggtgcct ggagatggga atgtggcctc agtgcctctg
4201 agtaggtgcc atgaggcacc tttgctttct gcccagagtg gccatgagca ccagaacaga
4261 tgatctccat ttccgccagc tgcctgtagc cacgtggcat cctgcctgtg gtctgggtga
4321 gatttactgt gaccagatgt agaataaatg tgtctcatcc tgcaaaaaaa aaaaaaaaaa
4381 aaaaaaa
//