LOCUS BC012687 1075 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus H3 histone, family 3A, mRNA (cDNA clone MGC:13931
IMAGE:4224280), complete cds.
ACCESSION BC012687
VERSION BC012687.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1075)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1075)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Jeffrey E. Green, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 18 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982294.
FEATURES Location/Qualifiers
source 1..1075
/organism="Mus musculus"
/mol_type="mRNA"
/strain="FVB/N"
/db_xref="taxon:10090"
/clone="MGC:13931 IMAGE:4224280"
/tissue_type="Colon, normal. 5 month old male mouse."
/clone_lib="NCI_CGAP_Co24"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1075
/gene="H3f3a"
/gene_synonym="H3.3A"
/db_xref="GeneID:15078"
/db_xref="MGI:MGI:1097686"
CDS 106..516
/gene="H3f3a"
/gene_synonym="H3.3A"
/codon_start=1
/product="H3 histone, family 3A"
/protein_id="AAH12687.1"
/db_xref="GeneID:15078"
/db_xref="MGI:MGI:1097686"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 334 a 230 c 219 g 292 t
ORIGIN
1 ccacgcgtcc gccgcgccgc tgccgctctc caacgccagc gccgcctctc gcttgccgag
61 ctccagccga aggagaaggg gggtaagtaa ggaggtgtcc ttaccatggc tcgtacaaag
121 cagactgccc gcaaatccac cggtggtaaa gcacccagga aacaactggc tacaaaagcc
181 gctcgcaaga gtgcgccctc tactggaggg gtgaagaaac ctcatcgtta caggcctggt
241 actgtggccc tccgtgaaat cagacgctat cagaagtcca ctgaacttct gatccgcaag
301 ctcccctttc agcgtctggt gcgagaaatt gctcaggact tcaaaacaga tctgcgcttc
361 cagagtgcag ctattggtgc tttgcaggag gcaagtgagg cctatctggt tggccttttt
421 gaagatacca atctgtgtgc tatccatgcc aaacgtgtaa caattatgcc aaaagatatc
481 cagctagcac gccgcatacg cggagaacgt gcttaagagt ccactatgag gggaaacatt
541 tcattctcaa aaaaattttt tttcctcttc ttcctgttat cagtagttct gaatgttaga
601 tattttttcc atggggtcaa aggtacctaa gtatatgatt gcgagtggaa acatagggga
661 cagaatcagg tattggcgtt tctccacgtt catttgtgtg tgaattttta atataaatgc
721 aagatggaaa gcattaatgc aagcaaaatg tttcagtgaa cacatttcaa cagttcaact
781 ttataacaat tataaataaa cctgttaaaa ttttctggac aatgccagca tttggatttt
841 tttaaaataa gtaaatttct tattgacggc aactaaatgg tgtttgtagc atttttatca
901 cacagtagat tccatccatt cactatactt ttctaactga gttgtcctac atacaagtac
961 atgtttttaa tgttgtcagt cttctgtgct gttcctgtaa gtttgctatt aaaatacatt
1021 aaactaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//