LOCUS BC012602 1024 bp mRNA linear HUM 12-NOV-2003
DEFINITION Homo sapiens signaling lymphocytic activation molecule family
member 1, mRNA (cDNA clone IMAGE:4296969), complete cds.
ACCESSION BC012602
VERSION BC012602.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1024)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1024)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506968
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1024
/db_xref="H-InvDB:HIT000035894"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4296969"
/tissue_type="Prostate"
/clone_lib="NIH_MGC_83"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1024
/gene="SLAMF1"
/gene_synonym="CDw150"
/gene_synonym="SLAM"
/db_xref="GeneID:6504"
/db_xref="MIM:603492"
CDS 354..788
/gene="SLAMF1"
/gene_synonym="CDw150"
/gene_synonym="SLAM"
/codon_start=1
/product="SLAMF1 protein"
/protein_id="AAH12602.1"
/db_xref="GeneID:6504"
/db_xref="MIM:603492"
/translation="MDPKGLLSLTFVLFLSLAFGASYGTGGRMMNCPKILRQLGSKVL
LPLTYERINKSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLGDRYKFYLEN
LTLGIRESRKEDEGWYLMTLEKSLHFGYLYFVLGADHDNLQT"
BASE COUNT 373 a 210 c 225 g 216 t
ORIGIN
1 gggggagaca gctaaggaaa gaagctgggg cgcatgtttc tgcccaaagc cgggttttgg
61 ccgaggtgac tacacacccc ctttcctggc tcccataggc taagtgcctg gcttcttgag
121 aagcctgctt cttgagaaca aaaaagtgat ttaaagcctc atgggagatg agcaatcctc
181 aagacacaag cagaaaaagt cccagtgata caggaagcgg gttcaggaac ctgctggttc
241 ctgatacata aatcagacag cctctgctgc atgacacgaa gcttgcttct gcctggcatc
301 tgtgagcagc tgccaggctc cggccaggat cccttccttc tcctcattgg ctgatggatc
361 ccaaggggct cctctccttg accttcgtgc tgtttctctc cctggctttt ggggcaagct
421 acggaacagg tgggcgcatg atgaactgcc caaagattct ccggcagttg ggaagcaaag
481 tgctgctgcc cctgacatat gaaaggataa ataagagcat gaacaaaagc atccacattg
541 tcgtcacaat ggcaaaatca ctggagaaca gtgtcgagaa caaaatagtg tctcttgatc
601 catccgaagc aggccctcca cgttatctag gagatcgcta caagttttat ctggagaatc
661 tcaccctggg gatacgggaa agcaggaagg aggatgaggg atggtacctt atgaccctgg
721 agaaaagttt acattttggc tatctttact ttgttctggg agctgatcat gataacctgc
781 agacctgatc aagcctctgt gcctcagttt ctctctcagg ataaagagtg aatagaggcc
841 gaagggtgaa tttcttatta tacataaaac actctgatat tattgtaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaa
//