LOCUS       BC012589                1201 bp    mRNA    linear   HUM 01-SEP-2008
DEFINITION  Homo sapiens chemokine (C-X-C motif) ligand 13, mRNA (cDNA clone
            MGC:13521 IMAGE:4246053), complete cds.
ACCESSION   BC012589
VERSION     BC012589.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1201)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1201)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CLONTECH
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 19 Row: h Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5453576.
FEATURES             Location/Qualifiers
     source          1..1201
                     /db_xref="H-InvDB:HIT000035886"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:13521 IMAGE:4246053"
                     /tissue_type="Skeletal Muscle"
                     /clone_lib="NIH_MGC_81"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1201
                     /gene="CXCL13"
                     /gene_synonym="ANGIE"
                     /gene_synonym="ANGIE2"
                     /gene_synonym="BCA-1"
                     /gene_synonym="BCA1"
                     /gene_synonym="BLC"
                     /gene_synonym="BLR1L"
                     /db_xref="GeneID:10563"
                     /db_xref="HGNC:HGNC:10639"
                     /db_xref="MIM:605149"
     CDS             51..380
                     /gene="CXCL13"
                     /gene_synonym="ANGIE"
                     /gene_synonym="ANGIE2"
                     /gene_synonym="BCA-1"
                     /gene_synonym="BCA1"
                     /gene_synonym="BLC"
                     /gene_synonym="BLR1L"
                     /codon_start=1
                     /product="chemokine (C-X-C motif) ligand 13"
                     /protein_id="AAH12589.1"
                     /db_xref="GeneID:10563"
                     /db_xref="HGNC:HGNC:10639"
                     /db_xref="MIM:605149"
                     /translation="MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIP
                     RRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVP
                     VFKRKIP"
BASE COUNT          394 a          222 c          231 g          354 t
ORIGIN      
        1 ggggacagcc tggactcaga gctcaagtct gaactctacc tccagacaga atgaagttca
       61 tctcgacatc tctgcttctc atgctgctgg tcagcagcct ctctccagtc caaggtgttc
      121 tggaggtcta ttacacaagc ttgaggtgta gatgtgtcca agagagctca gtctttatcc
      181 ctagacgctt cattgatcga attcaaatct tgccccgtgg gaatggttgt ccaagaaaag
      241 aaatcatagt ctggaagaag aacaagtcaa ttgtgtgtgt ggaccctcaa gctgaatgga
      301 tacaaagaat gatggaagta ttgagaaaaa gaagttcttc aactctacca gttccagtgt
      361 ttaagagaaa gattccctga tgctgatatt tccactaaga acacctgcat tcttccctta
      421 tccctgctct ggattttagt tttgtgctta gttaaatctt ttccaggaaa aagaacttcc
      481 ccatacaaat aagcatgaga ctatgtaaaa ataaccttgc agaagctgat ggggcaaact
      541 caagcttctt cactcacagc accctatata cacttggagt ttgcattctt attcatcagg
      601 gaggaaagtt tctttgaaaa tagttattca gttataagta atacaggatt attttgatta
      661 tatacttgtt gtttaatgtt taaaatttct tagaaaacaa tggaatgaga atttaagcct
      721 caaatttgaa catgtggctt gaattaagaa gaaaattatg gcatatatta aaagcaggct
      781 tctatgaaag actcaaaaag ctgcctggga ggcagatgga acttgagcct gtcaagaggc
      841 aaaggaatcc atgtagtaga tatcctctgc ttaaaaactc actacggagg agaattaagt
      901 cctactttta aaggatttct ttataaaatt tactgtctaa gattaatagc attcgaagat
      961 ccccagactt catagaatac tcagggaaag catttaaagg gtgatgtaca catgtatcct
     1021 ttcacacatt tgccttgaca aacttctttc actcacatct ttttcactga ctttttttgt
     1081 ggggggcggg gccgggggga ctctggtatc taattcttta atgattccta taaatctaat
     1141 gacattcaat aaagttgagc aaacatttta caaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1201 a
//