LOCUS BC012589 1201 bp mRNA linear HUM 01-SEP-2008 DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 13, mRNA (cDNA clone MGC:13521 IMAGE:4246053), complete cds. ACCESSION BC012589 VERSION BC012589.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1201) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1201) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: h Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5453576. FEATURES Location/Qualifiers source 1..1201 /db_xref="H-InvDB:HIT000035886" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13521 IMAGE:4246053" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1201 /gene="CXCL13" /gene_synonym="ANGIE" /gene_synonym="ANGIE2" /gene_synonym="BCA-1" /gene_synonym="BCA1" /gene_synonym="BLC" /gene_synonym="BLR1L" /db_xref="GeneID:10563" /db_xref="HGNC:HGNC:10639" /db_xref="MIM:605149" CDS 51..380 /gene="CXCL13" /gene_synonym="ANGIE" /gene_synonym="ANGIE2" /gene_synonym="BCA-1" /gene_synonym="BCA1" /gene_synonym="BLC" /gene_synonym="BLR1L" /codon_start=1 /product="chemokine (C-X-C motif) ligand 13" /protein_id="AAH12589.1" /db_xref="GeneID:10563" /db_xref="HGNC:HGNC:10639" /db_xref="MIM:605149" /translation="MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIP RRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVP VFKRKIP" BASE COUNT 394 a 222 c 231 g 354 t ORIGIN 1 ggggacagcc tggactcaga gctcaagtct gaactctacc tccagacaga atgaagttca 61 tctcgacatc tctgcttctc atgctgctgg tcagcagcct ctctccagtc caaggtgttc 121 tggaggtcta ttacacaagc ttgaggtgta gatgtgtcca agagagctca gtctttatcc 181 ctagacgctt cattgatcga attcaaatct tgccccgtgg gaatggttgt ccaagaaaag 241 aaatcatagt ctggaagaag aacaagtcaa ttgtgtgtgt ggaccctcaa gctgaatgga 301 tacaaagaat gatggaagta ttgagaaaaa gaagttcttc aactctacca gttccagtgt 361 ttaagagaaa gattccctga tgctgatatt tccactaaga acacctgcat tcttccctta 421 tccctgctct ggattttagt tttgtgctta gttaaatctt ttccaggaaa aagaacttcc 481 ccatacaaat aagcatgaga ctatgtaaaa ataaccttgc agaagctgat ggggcaaact 541 caagcttctt cactcacagc accctatata cacttggagt ttgcattctt attcatcagg 601 gaggaaagtt tctttgaaaa tagttattca gttataagta atacaggatt attttgatta 661 tatacttgtt gtttaatgtt taaaatttct tagaaaacaa tggaatgaga atttaagcct 721 caaatttgaa catgtggctt gaattaagaa gaaaattatg gcatatatta aaagcaggct 781 tctatgaaag actcaaaaag ctgcctggga ggcagatgga acttgagcct gtcaagaggc 841 aaaggaatcc atgtagtaga tatcctctgc ttaaaaactc actacggagg agaattaagt 901 cctactttta aaggatttct ttataaaatt tactgtctaa gattaatagc attcgaagat 961 ccccagactt catagaatac tcagggaaag catttaaagg gtgatgtaca catgtatcct 1021 ttcacacatt tgccttgaca aacttctttc actcacatct ttttcactga ctttttttgt 1081 ggggggcggg gccgggggga ctctggtatc taattcttta atgattccta taaatctaat 1141 gacattcaat aaagttgagc aaacatttta caaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 a //