LOCUS BC012494 2090 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens haloacid dehalogenase-like hydrolase domain containing
1A, mRNA (cDNA clone MGC:21172 IMAGE:4478358), complete cds.
ACCESSION BC012494
VERSION BC012494.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: d Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956917.
FEATURES Location/Qualifiers
source 1..2090
/db_xref="H-InvDB:HIT000035842"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21172 IMAGE:4478358"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2090
/gene="HDHD1A"
/gene_synonym="DXF68S1E"
/gene_synonym="GS1"
/db_xref="GeneID:8226"
/db_xref="HGNC:HGNC:16818"
/db_xref="MIM:306480"
CDS 55..699
/gene="HDHD1A"
/gene_synonym="DXF68S1E"
/gene_synonym="GS1"
/codon_start=1
/product="haloacid dehalogenase-like hydrolase domain
containing 1A"
/protein_id="AAH12494.1"
/db_xref="GeneID:8226"
/db_xref="HGNC:HGNC:16818"
/db_xref="MIM:306480"
/translation="MDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAA
QIIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSR
SASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVF
EDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE"
BASE COUNT 556 a 459 c 476 g 599 t
ORIGIN
1 gaaggcgcca ccatggcggc gcccccgcag cccgtcaccc acctcatctt tgacatggac
61 ggacttcttc tggatactga acggctgtat tcagtggtgt ttcaagaaat atgtaatcgc
121 tatgacaaga aatacagctg ggatgtaaag tccctggtta tgggtaagaa ggcattagag
181 gcggcacaga ttataataga cgtcttgcag ctcccgatgt ccaaagagga gctggtggaa
241 gaaagccaaa cgaagttaaa ggaagtgttc cccacggctg cgctcatgcc aggggcggag
301 aaactcatca tccacctgcg gaaacatggc atcccctttg cactggccac cagctcgagg
361 tccgcgtcgt tcgatatgaa gacaagccgc cacaaggagt tcttcagctt gttttcccac
421 attgtgctgg gagatgaccc cgaagtgcag catggcaagc cagacccaga catcttccta
481 gcttgtgcca agaggttctc tccccctcct gctatggaga agtgccttgt ctttgaagat
541 gctcccaatg gggtggaggc ggccctggca gctgggatgc aggtggtcat ggttcctgac
601 ggaaacttga gccgagatct gacaacaaag gccaccctgg tgctgaattc cctgcaggac
661 ttccagcccg agctgtttgg tttgccctcc tatgagtgag agggagggcc tcagtcttcc
721 gcccccagcc cactctcatg gtccacactg ctgggggaaa gggaaaggaa atcagcaact
781 cttcaatccc aacctgcgct gtgattttag cctcctgaga ttggagtttc catcccatgt
841 tggtttgtcc cagtctaacg tgttgataaa atgtgacttg acggttgaga caaaaaatac
901 agtagagaca gaaacgaagc ccagaacaaa gatgaaactt gaattaccat ctcagaagtc
961 aagctgatgg agtatgtgat aaagtgaatg tacatgtata tacacacaca cctccatata
1021 tacacgtgtg tatcagtttg gtaatatgca ggtaggcatt acatgcatat gtatgtagac
1081 atatgcatgc atgtatatgt aaaatatata cttttccaag acaaaatgga acatcacttc
1141 tctcttctag tttttctgaa cactggctgg gaaatgtaaa ctgtgtatgc atataagtat
1201 atgctttatg tatgcatatg tatgtagatg tgtttatatc tatcgtctgc atcactctcc
1261 tcagtgttga tgtcaacatg caatgacaac tgataaagcg agatggtagt tctgcctggt
1321 ttgcagtctg agtgggaaag tcctgttttt gatgagcact ccttgttagc taacatttaa
1381 attctttttg tgacctcaga atgtctctgg atctttcctc attgactgac tctgtgccac
1441 gtcatccata gtttattgtt agtatgaaca caactgtaac atttacctgg tatctacatc
1501 cttacctgca ttggaaaatg tttgctacct cacaacaacc atttgcctcc tttaagaaca
1561 ctgatgggct gcactttttg gatagaaata gaatttgatt tcagaatgta tgcttggtga
1621 gtctcagtgc ccaggaacac ttttggaata atttatcaga cattgaactt ctgtgattaa
1681 tcgcttttat agatttactc agtctttaaa attcgtctct gatttgccag agaaaaacgg
1741 tggtagccat ggaaatcggg agtgaaggag cactgcttca ttgtggctca gcccttccta
1801 ggggcctctg ccctttgatg tccttgagct actcttcagc tctggaagtt gtggacaaac
1861 tgtaggaatg tatgtgtgcg tgtggtggag tgattgtctg tgaatgacag gccctggcta
1921 ttgattgatg ttgcatcaat ttagcaaatt catttcctca ttcttgatgg cctgaatata
1981 tgtctgcact tttaatgctc ctcttaacca gttgtaacat cttaccattt ccctaacaaa
2041 ttgaattagt ttaataaaat cttttgacac atgttaaaaa aaaaaaaaaa
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