LOCUS BC012458 2154 bp mRNA linear HUM 27-JAN-2004 DEFINITION Homo sapiens sec1 family domain containing 2, mRNA (cDNA clone IMAGE:3860908), partial cds. ACCESSION BC012458 VERSION BC012458.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2154) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2154) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: f Column: 24. FEATURES Location/Qualifiers source 1..2154 /db_xref="H-InvDB:HIT000087862" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3860908" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_66" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2154 /gene="SCFD2" /gene_synonym="FLJ39514" /gene_synonym="STXBP1L1" /db_xref="GeneID:152579" CDS <1..1955 /gene="SCFD2" /gene_synonym="FLJ39514" /gene_synonym="STXBP1L1" /codon_start=3 /product="SCFD2 protein" /protein_id="AAH12458.1" /db_xref="GeneID:152579" /translation="SLHWGCGSTRLLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLS CLLKGRTVEILRDIICRSHFQYCVVVTTVSHAVHLTANHVPAAAAAEMEGQQPVFEQL EEKLCEWMGNMNYTAEVFHVPLLLAPVAPHFALTPAFASLFPLLPQDVHLLNSARPDK RKLGSLGDVDSTTLTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSQVIAADLAN YAPAKNRKKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVN MIALTALHTEEENYNVVAPGCLSQSSDTTAKALWEALLNTKHKEAVMEVRRHLVEAAS RENLPIKMSMGRVTPGQLMSYIQLFKNNLKALMNHCGLLQLGLATAQTLKHPQTAKWD NFLAFERLLLQSIGESAMSVVLNQLLPMIKPVTQRTNEDYSPEELLILLIYIYSVTGE LTVDKDLCEAEEKVKKALAQVFCEESGLSPLLQKITDWDSSINLTFHKSKIAVDELFT SLRDIAGARSLLKQFKSVYVPGNHTHQASYKPLLKQVVEEIFHPERPDSVDIEHMSSG LTDLLKTGFSMFMKVSRPHPSDYPLLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVL STRLLKPLNIPELLFATDRLHPDLGF" misc_feature 1620..1895 /gene="SCFD2" /gene_synonym="FLJ39514" /gene_synonym="STXBP1L1" /note="Sec1; Region: Sec1 family" /db_xref="CDD:pfam00995" BASE COUNT 556 a 539 c 539 g 520 t ORIGIN 1 agagcctgca ctggggctgc ggatccaccc gtctcctgga ggcggtgggg ggtcctgact 61 gtcacctgcg agagttcgag cccgacgcaa ttggtggtgg agccaagcag cccaaggcag 121 tgtttgtgct gagctgcctg ctgaaaggcc ggaccgtgga gatcctacgg gacatcatct 181 gccgcagtca cttccagtat tgtgtggtgg tcacaaccgt gagccacgct gtccacctca 241 cagctaatca tgtcccagcg gcggcagcgg ccgagatgga ggggcagcag ccggtgttcg 301 agcagctgga ggagaagctg tgtgaatgga tgggcaacat gaactacacg gccgaggtgt 361 tccatgtccc gttattgctt gcccctgttg ctccccactt tgccttgact ccagcttttg 421 catccctttt cccactgcta ccccaggatg tgcacctcct taatagcgcc cgaccggaca 481 agaggaagct gggaagcctg ggtgatgtgg actccactac gctaacccca gagctgctgc 541 tgcagatcag atgcctagtg tcaggcctca gttctctgtg tgaacattta ggagtacggg 601 aggagtgttt tgctgtaggt tccttaagtc aggtcatcgc tgcggatctg gccaattatg 661 cccctgcaaa gaacaggaag aagactgctg caggcagggc atcagtggtt tttgtggaca 721 gaaccctgga tctcacagga gcagttggac atcatggaga caacttagta gagaagatca 781 tttcagcact tccccagctc ccaggccaca caaatgatgt gatggttaac atgatagcgc 841 tcactgcact ccatactgag gaggaaaatt ataatgtggt tgcaccaggc tgtctttcac 901 aatccagtga caccacagcc aaagccctat gggaagcttt actgaacact aagcacaaag 961 aggcagtgat ggaagttcgg agacatctag tggaagcggc aagcagagaa aacctgccaa 1021 tcaagatgag tatggggaga gtcacaccgg gacagctcat gtcctatatt cagctcttca 1081 agaacaacct caaagctcta atgaatcatt gtggcctcct ccagcttgga ctggccacag 1141 ctcaaacgtt gaaacaccca cagactgcca agtgggacaa ctttctggct tttgaaaggc 1201 tccttcttca gagcattggg gagtcagcaa tgtccgttgt gttaaatcag ctgctgccca 1261 tgattaagcc tgtaacccag agaaccaacg aggactacag ccctgaggaa ctgctgatcc 1321 ttctcatata tatttattct gtcactggag agctcacggt agacaaagac ctgtgtgaag 1381 cagaagaaaa agtcaagaaa gcattggctc aggttttctg tgaggaatct ggattgtcac 1441 ctttgctgca aaaaattacg gactgggact cttcaattaa tctgacattt cacaaatcca 1501 aaattgccgt ggatgaactc tttacttcac ttcgggatat tgctggagct cggagtctcc 1561 tgaaacagtt taagtctgta tatgttcctg gaaatcatac ccaccaggca tcttataagc 1621 cattgttgaa gcaagttgtg gaggaaatat ttcatcccga gaggccagat tccgttgata 1681 ttgaacacat gtcttcaggc ctcactgatc tccttaaaac tggatttagc atgttcatga 1741 aggtgagccg gcctcatcct agtgactacc ccctcctgat cctctttgtg gtaggtgggg 1801 tcacagtctc tgaagtgaaa atggtcaaag atcttgtggc atcgttgaag ccaggaaccc 1861 aggtaatcgt gctgtccaca cgactcctga agccacttaa cattcctgag ctgttatttg 1921 caactgaccg actgcatcca gaccttggct tctgagcatc cgctaagaag ataagaccta 1981 ctcaagctgg aaatgccgat gcaattttct gccaccactc caaatactcc tccacaacca 2041 gcgtccctgt cactaattgc gagaatgatg gaattctgcc tgaagggtct tgatacctac 2101 tcagtgaggt actttgcttg gattgctgtg attcttaaaa aaaaaaaaaa aaaa //