LOCUS BC012452 1248 bp mRNA linear HUM 08-SEP-2006 DEFINITION Homo sapiens heparan-alpha-glucosaminide N-acetyltransferase, mRNA (cDNA clone IMAGE:3880903), complete cds. ACCESSION BC012452 VERSION BC012452.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1248) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1248) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: n Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1248 /db_xref="H-InvDB:HIT000035821" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3880903" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1248 /gene="HGSNAT" /gene_synonym="FLJ22242" /gene_synonym="FLJ32731" /gene_synonym="HGNAT" /db_xref="GeneID:138050" /db_xref="HGNC:HGNC:26527" CDS 201..821 /gene="HGSNAT" /gene_synonym="FLJ22242" /gene_synonym="FLJ32731" /gene_synonym="HGNAT" /codon_start=1 /product="HGSNAT protein" /protein_id="AAH12452.1" /db_xref="GeneID:138050" /db_xref="HGNC:HGNC:26527" /translation="MALGLCRCFHPRHSMAAFGLFPALPSALNSHPACTCLLDPSTWR PAHVSGPALASSPQILSVFSLGFPGFVNGSCVSRYKPDIIFPPGLPPPDLPSSVSIFY LQLLCSHGHCCITESGPLLSFSNWPPSLVPHFLKSPVHCHQIKLSPARSPLSEKPPLT WKHHCLAHILTYSPSRLDPHTSFQPPLPLHSLLPPPPPHPLVSPPL" BASE COUNT 251 a 401 c 220 g 376 t ORIGIN 1 aatggaggca gcgttcctac ttgtcatcac acagctgaag acattgtttc ttaggtgtga 61 aatcggggac aaaggacaaa cagagacaca cggcattgtt catgggaggc atcgtcaccc 121 tcctgggtgt tctgtgggaa tttcctgtgt gaggaaaacg tggccacagg gttgtgctgt 181 acccaccctt ccccggcgag atggccctcg gcctgtgccg ctgcttccac cctcgccact 241 ccatggcagc ttttggtctg tttccggctc tgccctctgc cctgaactct catccggctt 301 gtacctgcct gctggacccc tccacctgga ggccagccca tgtctcaggc ccagccctag 361 cctcttctcc tcaaattcta agtgttttct ctttaggttt ccctggcttt gtgaatggat 421 catgtgtctc taggtataaa cctgacatca tctttccacc cggcttacct ccaccagatc 481 tccccagttc tgtctccatc ttctacctgc agctgctctg ttctcatggt cactgctgca 541 tcactgagtc tggacccttg ttatcatttt caaactggcc tccttccctc gttccccact 601 tcttaaagtc acctgtccat tgccaccaga ttaagctttc tccagccaga tcacctctct 661 ctgagaaacc tccattgaca tggaaacacc attgtctggc acacatactc acatactcac 721 cttcccgtct tgatccccac acatctttcc agcctcccct cccactccac tccctgctcc 781 ctcctccacc tccccatcct cttgtctccc ctcccctctg aatccagccc agcggggctt 841 ctcctgcctc catcacatca cagaagtacc tcctgcttct ggttttaatt agagccttcc 901 ccgattacat tttcctctga attttttcct atctacattt gatctgtcat gtttaaaccc 961 cctacttcta agggaacttc tctaatctct tatcctcatc cccaaatagt gttttcttcc 1021 tctgggttct tataatgttg gtatcaatct cacagcattt agtgcttcct gcctggtgtg 1081 acagttacct gtgtgcatgt gcaatttcta atttcccacg ctagactgtg agcttcctaa 1141 ggcaagaatc atgccttgtt ggtttctgta ttcctcatgg tgccaaacac agtgccttct 1201 acattgcagg cgctgaataa acatttttaa agcaaaaaaa aaaaaaaa //